Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  171 bits (433), Expect = 9e-47
 Identities = 115/360 (31%), Positives = 189/360 (52%), Gaps = 15/360 (4%)

Query: 180 LIGVGIMSVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSK-DLSHRLENDRKDELG 238
           + G+ I  ++     +L ++ +   I  PL++  A + ++++ + DL+ RL +DR DELG
Sbjct: 358 IFGMTIAGLLIAGIGLLVIWLVGHGIARPLKQMVAMLNDIAQGEGDLTRRLTSDRADELG 417

Query: 239 QLAVSINSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNIT 298
            +A   N+ +  +   + QV  +   ++DS++   ++A  T+Q  + Q  E  +V T + 
Sbjct: 418 AIANGFNTFLIKLQGMITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQMVEIDQVATAVH 477

Query: 299 DMQGKQQQVEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVELNN 358
           +M    Q V     +A++  +H      Q  +     S  I  L  +I      +  L  
Sbjct: 478 EMTATAQDVARNATQAAQAASHADQAASQGMRIVRDTSTSIGALAEEIGKAVSVVQTLAK 537

Query: 359 QTGQVSSILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATGN 418
            +  +++IL  I+GIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +T +AT  
Sbjct: 538 DSENINAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEE 597

Query: 419 IENIIAGFQ-------RDSQASLSSVDTVCSHAHQRSSEVEELSAAMTRVVSEMQQVLSH 471
           I+ +I   Q       R  + S S  D    HA + +  +E ++ A++ V+++M   ++ 
Sbjct: 598 IQTMIQQLQQGTRDVVRVMEDSQSRTDESVQHAAKAAEALETITQAVS-VINDMNTQIAS 656

Query: 472 AMGIQEQTKRTTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLESLLNQF 531
           A       +  + V+ +I   V  I   AN  +  A E+   S DL  L++Q   L+NQF
Sbjct: 657 A------AEEQSAVAEDINRNVINIGQVANEVAGGADESSAASADLTKLAEQQRRLINQF 710