Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  181 bits (458), Expect = 1e-49
 Identities = 116/354 (32%), Positives = 190/354 (53%), Gaps = 15/354 (4%)

Query: 185 IMSVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSKDLSHRLENDRKDELGQLAVSI 244
           I +++AL   ++    + R I  P+Q+T A +  ++ S DLSH ++  R+DELG L   I
Sbjct: 292 ISTLLALLVGVIAALVITRQITRPIQETLAVVERIA-SGDLSHNIQVTRRDELGVLQQGI 350

Query: 245 NSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNITDMQGKQ 304
             +  T+ + +  ++D    +A +A++L+ V + T    N+Q+ ET +V T + +M    
Sbjct: 351 QRMGTTLRELISGIRDGVTQIASAAEELSAVTEQTSAGVNSQKIETDQVATAMHEMTATV 410

Query: 305 QQVEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVELNNQTGQVS 364
           Q+V    E+AS          +   K    A   I+ L  ++      +  L  ++ ++ 
Sbjct: 411 QEVARNAEQASLAAADADGQARAGDKVVAEAIAQIERLAAEVARSTDAMTHLQQESNKIG 470

Query: 365 SILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATGNIENIIA 424
           S++ VIK +AEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT ++T  IE ++A
Sbjct: 471 SVMDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEGLVA 530

Query: 425 GFQRDSQA-------SLSSVDTVCSHAHQRSSEVEELSAAMTRVVSEMQQVLSHAMGIQE 477
           G Q  +Q        S S  D+      +    +E ++  ++ + S  QQ+   A   ++
Sbjct: 531 GLQNGTQQVANVMNNSRSLTDSSVELTRKAGVSLENITRTVSNIQSMNQQI---AAAAEQ 587

Query: 478 QTKRTTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLESLLNQF 531
           Q+    E+S  I N  DV    +  T+ ++ ET + S++L  L  QL+ +++ F
Sbjct: 588 QSAVAEEISRSIVNVRDV----SEQTATASDETAKSSVELARLGSQLQQMVSHF 637