Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  161 bits (408), Expect = 7e-44
 Identities = 106/361 (29%), Positives = 188/361 (52%), Gaps = 16/361 (4%)

Query: 179 TLIGVGIMSVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSK-DLSHRLENDRKDEL 237
           TL  + + +  AL G +L ++     +  P+   +A + +++    DL+ RL   +KDEL
Sbjct: 358 TLKALLVGAAAALLGLLL-IWLTATGVTRPINNVAAMLKDIASGDGDLTQRLAYAKKDEL 416

Query: 238 GQLAVSINSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNI 297
           G+LA   N  +D +  ++ Q++ +      +A + + +A+ T +    Q +E  +V T  
Sbjct: 417 GELANWFNRFLDKLQPTIAQIKQSITEARGTADQSSAIARQTSEGMQVQFREIDQVATAS 476

Query: 298 TDMQGKQQQVE-------FATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVK 350
            +M      V         A   A +      SI++QS +   + +E++   VG++EA+ 
Sbjct: 477 NEMSATAHDVANSASNAASAARGADQSAREGMSIIEQSTRDITSLAEEVSKAVGEVEALA 536

Query: 351 QRIVELNNQTGQVSSILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLAS 410
                +N++  Q+ S+L VI+ IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA 
Sbjct: 537 -----VNSE--QIGSVLEVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRNLAK 589

Query: 411 RTTEATGNIENIIAGFQRDSQASLSSVDTVCSHAHQRSSEVEELSAAMTRVVSEMQQVLS 470
           RT ++   I  +I   Q  ++  ++++ +  S A   + ++ + + A+ ++   +  +  
Sbjct: 590 RTQDSVEEIRLVIERIQSGTRGVVATMHSSQSQAQSNAGQIHQAAQALGKISDAVTVISD 649

Query: 471 HAMGIQEQTKRTTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLESLLNQ 530
             + I    ++ + V+ E+   V  I       +  A+E+  IS  L  L+ Q   L++Q
Sbjct: 650 MNLQIASAAEQQSAVAEEVNRNVSAIRTVTETLTGQATESAAISSQLNALASQQMKLMDQ 709

Query: 531 F 531
           F
Sbjct: 710 F 710