Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  159 bits (401), Expect = 3e-43
 Identities = 102/319 (31%), Positives = 163/319 (51%), Gaps = 6/319 (1%)

Query: 216 MCEVSKSKDLSHRLENDRKDELGQLAVSINSLMDTVSDSLQQVQDTSHSLADSAKKLTNV 275
           + E + S  L  ++  D +    +L +SI S    +   L ++QDT+  L D A +   +
Sbjct: 204 LAEQTTSDPLIAQMYTDSRGAQARLEMSILSQEARLKTCLTRLQDTAEHLNDQAAQSNTL 263

Query: 276 AQVTDQAANNQQKETAEVQTNITDMQGKQQQVEF---ATEEASKLVNHTTSIVQQSAKQA 332
           A  +      Q+ ET +V T +  M    Q+V      T +A++  N  T   +  A + 
Sbjct: 264 AHNSSSGLERQRVETEQVATAVNQMAATTQEVASHVQRTADATQEANRLTGRGRDIAGET 323

Query: 333 HAASEDIKNLVGDIEAVKQRIVELNNQTGQVSSILGVIKGIAEQTNLLALNAAIEAARAG 392
             A + +   VG+       + +L   + ++  ++ VIKGIA+QTNLLALNAAIEAARAG
Sbjct: 324 REAIQRLSVAVGETGVT---VTQLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAG 380

Query: 393 EQGRGFAVVADEVRHLASRTTEATGNIENIIAGFQRDSQASLSSVDTVCSHAHQRSSEVE 452
           E GRGFAVVADEVR LA RT E+TG I  +IA  Q+ + A++ ++D     A +  + V 
Sbjct: 381 EMGRGFAVVADEVRQLAQRTAESTGQIHALIAKLQQTAAAAVQTMDAGHRQAEEGVARVM 440

Query: 453 ELSAAMTRVVSEMQQVLSHAMGIQEQTKRTTEVSHEIQNKVDVITHHANNTSQSASETRE 512
           E   A+  +   +  +      I   T+  + V+ EI   +  I   A+ TS+ A  + +
Sbjct: 441 EADQALVGISEAVAHITDMTTQIAAATEEQSSVAEEISRNISTIALLADQTSEQAMNSAQ 500

Query: 513 ISIDLEHLSQQLESLLNQF 531
           +S +L H +    SL+ +F
Sbjct: 501 LSEELTHTANTQYSLVERF 519