Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  176 bits (446), Expect = 2e-48
 Identities = 121/355 (34%), Positives = 194/355 (54%), Gaps = 17/355 (4%)

Query: 185 IMSVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSKDLSHRLENDRKDELGQLAVSI 244
           + +V+AL   ++  + + R IV+PL +T      V+ S DLSH L + R+DELGQL  ++
Sbjct: 291 LATVLALIFGLVAAWAITRQIVIPLNQTLQVAQRVA-SGDLSHNLTSMRQDELGQLQRAM 349

Query: 245 NSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNITDMQGKQ 304
            S+   + + +  + D    +A +A++L+ V + T    N+Q+ ET +V T + +M    
Sbjct: 350 QSMTVGLRELIGGISDGVTQIASAAEQLSAVTEQTSAGVNSQKVETDQVATAMNEMAATV 409

Query: 305 QQVEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVELNNQTGQVS 364
           Q+V    EEAS+         ++  K    A   I+ L  ++      + +L  ++ ++ 
Sbjct: 410 QEVARNAEEASEAAVAADQQAREGDKVVGEAIAQIERLATEVGNSTVAMGDLKRESDKIG 469

Query: 365 SILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATGNIENIIA 424
           S+L VIK +A+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT ++T  IE +I 
Sbjct: 470 SVLDVIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKSTEEIEELIV 529

Query: 425 GFQRDSQASLSSVDTVCSHAHQRSSEVEELS-------AAMTRVVSEMQQVLSH-AMGIQ 476
           G Q  +Q     V T+  ++   +    EL        A++TR VS +Q + S  A   +
Sbjct: 530 GLQSGTQ----QVATIMDNSRGLTDSSVELPRRAGSALASITRTVSTIQAMNSQIATAAE 585

Query: 477 EQTKRTTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLESLLNQF 531
           +Q+    E++  + N  DV    +  T+ ++ ET   S +L  L   L++L+ +F
Sbjct: 586 QQSAVAEEINRSVLNVRDV----SEQTAAASEETAASSTELARLGTHLQALVGRF 636