Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 715 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  163 bits (413), Expect = 2e-44
 Identities = 105/354 (29%), Positives = 179/354 (50%), Gaps = 2/354 (0%)

Query: 179 TLIGVGIMSVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSK-DLSHRLENDRKDEL 237
           TL+ +G+  + A+ G +L ++ M R +  P+   +  + +++  + DL+ RL  D++DEL
Sbjct: 361 TLLELGLGLLAAVVGLIL-VWLMARSVTRPILGVAHMLEDIASGEGDLTRRLAYDKQDEL 419

Query: 238 GQLAVSINSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNI 297
           GQLA   N  +D +   + +V+ +      +A +   +A  T      Q ++  +V T  
Sbjct: 420 GQLAGWFNRFLDKLQPIIAEVKRSVQDARGTADQSAAIATQTSAGMEQQYRQVDQVATAS 479

Query: 298 TDMQGKQQQVEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVELN 357
            +M    Q V  +  +A++         +         + +I  L  D+     ++  L 
Sbjct: 480 HEMSATAQDVARSAAQAAQAARDADQATRDGLTVIEHTTHNIGALASDMSTAMTQVEGLA 539

Query: 358 NQTGQVSSILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATG 417
             + ++ S+L VI+GIAEQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RT E+  
Sbjct: 540 ANSEKIGSVLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQESVE 599

Query: 418 NIENIIAGFQRDSQASLSSVDTVCSHAHQRSSEVEELSAAMTRVVSEMQQVLSHAMGIQE 477
               +I   Q  ++A + S+      A     +V +   A+ ++   +  +    + I  
Sbjct: 600 ETRLVIEHLQNGTEAVVGSMGNSYRQAQGSVEQVGQAVTALRQIGDAVTVISDMNLQIAS 659

Query: 478 QTKRTTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLESLLNQF 531
             +  + V+ EI N V  I     + S+ A+E+  +S  L  L+ Q + L++QF
Sbjct: 660 AAEEQSAVAEEINNNVATIRDVTESLSEQANESARVSQALNSLANQQQGLMDQF 713