Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  164 bits (414), Expect = 1e-44
 Identities = 104/354 (29%), Positives = 188/354 (53%), Gaps = 4/354 (1%)

Query: 180 LIGVGIMSVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSKDLSHRLENDRKDELGQ 239
           +IG+ +++ +   G  + L    R IVLPL + S  + +   S DL+  +    +DE  +
Sbjct: 192 VIGMIVLTALVTIGLAVLL---TRSIVLPLAQ-SLKVAQGVASGDLTGEISVCGRDEPAR 247

Query: 240 LAVSINSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNITD 299
           L  ++ S+ + + D+++++ ++S+ LA ++++L+ V +   +  + Q +E  +  T +  
Sbjct: 248 LQQALKSMQENLRDTIRRISESSNQLASASEELSCVTEDATRGLHQQSQEIEQAATAVNQ 307

Query: 300 MQGKQQQVEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVELNNQ 359
           M    ++V       S+    +  I Q+  +Q       I+ L  D+     ++ +L  +
Sbjct: 308 MTAAVEEVASNAVATSQASRESDRIAQRGREQVQQTVVSIEALATDVTDNVTQVEDLAQK 367

Query: 360 TGQVSSILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATGNI 419
              +S +L VI+ IAEQTNLLALNAAIEAARAG+ GRGFAVVADEVR LA RT ++T  I
Sbjct: 368 VYGISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALAHRTQQSTQEI 427

Query: 420 ENIIAGFQRDSQASLSSVDTVCSHAHQRSSEVEELSAAMTRVVSEMQQVLSHAMGIQEQT 479
           E +I+G Q+ +  ++SS+    + A       +    A+  + S    +    + I   +
Sbjct: 428 EQMISGIQQGTDQAVSSMQQSNTRARSTLDIAKSAGTALEEIASAFTLINERNLVIASAS 487

Query: 480 KRTTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLESLLNQFTL 533
           ++   V+ E+   +  I   A+ TS  A++T   S DL  L+  L +L+ +F++
Sbjct: 488 EQQAAVAREVDRNLMNIRDLAHQTSTGANQTSAASHDLSRLAVDLNTLVARFSV 541