Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  158 bits (400), Expect = 5e-43
 Identities = 106/324 (32%), Positives = 176/324 (54%), Gaps = 28/324 (8%)

Query: 224 DLSHRLENDRKDELGQLAVSINSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAA 283
           +++ R+E    +E  +L+  INSL D + D L ++   S  L  +A      +       
Sbjct: 363 NMTQRIEIRYNNEFSRLSRHINSLADNLHDILVKLNSASDDLTATASTNQTTSLSAQNKL 422

Query: 284 NNQQKETAEVQTNITDMQGKQQQVEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLV 343
           N+Q+++T+ V   +T+M    Q+V  + +       ++ ++VQQ    + +  + +   +
Sbjct: 423 NSQREQTSSVAAAMTEMAHSVQEVANSAQ-------NSLAMVQQVETASESGRQIMSTNI 475

Query: 344 GDIEAVKQRIVE-------LNNQTGQVSSILGVIKGIAEQTNLLALNAAIEAARAGEQGR 396
             I  ++ R++E       L   + Q+ SIL VI+ IAEQTNLLALNAAIEAARAGEQGR
Sbjct: 476 STIRQLETRLIESVEAVGDLRKMSSQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGR 535

Query: 397 GFAVVADEVRHLASRTTEATGNIENIIAGFQRDS-------QASLSSVDTVCSHAHQRSS 449
           GFAVVADEVR LA RTT++T  IE++I+  Q  S       ++ +  ++     A   +S
Sbjct: 536 GFAVVADEVRVLAQRTTQSTSEIESMISNLQSSSSLASKVIESCMQDMELSVEQASHANS 595

Query: 450 EVEELSAAMTRVVSEMQQVLSHAMGIQEQTKRTTEVSHEIQNKVDVITHHANNTSQSASE 509
            +EE+ A +   +S M   +S A G  EQ + TT ++  I++    I H ++ + Q+ S+
Sbjct: 596 AMEEIQALIIE-ISHMSTHISQAAG--EQNETTTSIARSIED----INHISDESYQAMSQ 648

Query: 510 TREISIDLEHLSQQLESLLNQFTL 533
             + S +L  L+ Q   L+++F L
Sbjct: 649 IAQTSANLTALANQQSELVHRFKL 672