Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  171 bits (433), Expect = 7e-47
 Identities = 103/335 (30%), Positives = 175/335 (52%), Gaps = 7/335 (2%)

Query: 201 MRRIIVLPLQKTSAFMCEVSKSK-DLSHRLENDRKDELGQLAVSINSLMDTVSDSLQQVQ 259
           M  +   PL + +  +  +S+   DL+ RL  + KDE+GQ+  SIN  ++ +      V 
Sbjct: 244 MLHVSFKPLSRLNTLVANLSQGNGDLTQRLAVESKDEIGQICNSINLFIEKLQQMFIDVA 303

Query: 260 DTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNITDMQGKQQQVEFATEEASKLVN 319
           D+S  +  +   L+N A+      N   +ET +  T I +M      +  + ++A+ L  
Sbjct: 304 DSSKEIDRAVVHLSNQARSNLNTLNQHTQETEQAITAIEEMSASAGSIAQSADDAALLTE 363

Query: 320 HTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVELNNQTGQVSSILGVIKGIAEQTNL 379
            T     +S +    A   +  LV  + ++ + I  ++  T Q++S+L VI  IAEQTNL
Sbjct: 364 RTNRYADESKQTVTEAVNSVNGLVNQVSSMAETITRMSEDTKQINSVLQVIGAIAEQTNL 423

Query: 380 LALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATGNIENIIAGFQRDSQASLSSVDT 439
           LALNAAIEAARAGEQGRGFAVVADEVR LASRT ++T  I +++A  +  ++  +  +D+
Sbjct: 424 LALNAAIEAARAGEQGRGFAVVADEVRALASRTQQSTSQINDMLATLKTTTENVVKEMDS 483

Query: 440 V---CSHAHQRSSEVEELSAAMTRVVSEMQQVLSHAMGIQEQTKRTTEVSHEIQNKVDVI 496
               C    +R++ V +    +T  V+EM  + +    I        +V+HE+   +  I
Sbjct: 484 TRIHCEETAERTNHVMDSLNVVTDSVAEMNNLNTL---IATSAMEQRQVTHEVSKNMAAI 540

Query: 497 THHANNTSQSASETREISIDLEHLSQQLESLLNQF 531
                  + +A++   +S +L++ S  L  ++ +F
Sbjct: 541 QEMVRKLNMNAAQVTSVSNELQNTSHALSDVVGRF 575