Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  166 bits (419), Expect = 3e-45
 Identities = 116/381 (30%), Positives = 199/381 (52%), Gaps = 5/381 (1%)

Query: 153 APEGEVLGVIRLEFNLNHLTQMVNHRTLIGVGIMSVIALFGFMLTLFFMRRIIVLPLQKT 212
           AP G +LG   L  ++ H      ++  + +G  ++I     +     + R ++ PL   
Sbjct: 161 APWGWILGSGMLLDDIEHAV----YQQFLRMGFATLIVTLVMIGLGVVISRAVIQPLDTI 216

Query: 213 SAFMCEVSKSKDLSHRLENDRKDELGQLAVSINSLMDTVSDSLQQVQDTSHSLADSAKKL 272
              M +V++  DL+ ++    KDELG +A  IN+ +  V D+L +   ++ S+A++A ++
Sbjct: 217 KDVMKKVAQG-DLTAQIPVLGKDELGIVAQRINNSIAAVHDALVESVQSASSVAEAAIRI 275

Query: 273 TNVAQVTDQAANNQQKETAEVQTNITDMQGKQQQVEFATEEASKLVNHTTSIVQQSAKQA 332
            + A+ T QA  +Q+ + +++ T +  M      V    E+ ++     +       K  
Sbjct: 276 ASSAEETSQAVVSQRDQLSQLATAMNQMTATVADVAGHAEDTARDTLDASKEANLGDKDV 335

Query: 333 HAASEDIKNLVGDIEAVKQRIVELNNQTGQVSSILGVIKGIAEQTNLLALNAAIEAARAG 392
           H++ + I+ L  ++     ++ +L     Q+S +  VI GI+EQTNLLALNAAIEAARAG
Sbjct: 336 HSSVDSIRALSVELGVATDQVNKLKEGVMQISEVTSVISGISEQTNLLALNAAIEAARAG 395

Query: 393 EQGRGFAVVADEVRHLASRTTEATGNIENIIAGFQRDSQASLSSVDTVCSHAHQRSSEVE 452
           +QGRGFAVVADEVR+LASRT  +T  I+ +I   Q+ + ++ S++    + A    +  E
Sbjct: 396 DQGRGFAVVADEVRNLASRTHHSTDEIQTMINRLQQLAVSTASAMQKSQALAANSVATAE 455

Query: 453 ELSAAMTRVVSEMQQVLSHAMGIQEQTKRTTEVSHEIQNKVDVITHHANNTSQSASETRE 512
              + ++ +V+ +Q V   A  I    +  + V+ E+   V  I   A   SQ+A+   E
Sbjct: 456 NAGSDLSLIVNHIQHVSDKATQIATAAEEQSAVAEEMNRNVSGINDAALEMSQAATYLAE 515

Query: 513 ISIDLEHLSQQLESLLNQFTL 533
            S  L  LS+QL+  L  F L
Sbjct: 516 ESEKLADLSRQLDQKLTAFKL 536