Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  153 bits (387), Expect = 2e-41
 Identities = 103/329 (31%), Positives = 168/329 (51%), Gaps = 8/329 (2%)

Query: 187 SVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSK-SKDLSHRLENDRKDELGQLAVSIN 245
           +VI    F   L F  R+++ PL + +  M  +S  S DL+ R+ N    E  ++  S N
Sbjct: 279 AVILASVFFAILLFTMRLMLKPLHQLTDAMVNISSGSADLTVRIPNSTDQEFSKIINSFN 338

Query: 246 SLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNITDMQGKQQ 305
             +  +   + +V+  S  +     +   + +V + +  +Q +E   + +++ +M     
Sbjct: 339 IFVGNLQSIVSEVKMNSEKINCITTETQELVEVCNNSVADQYRELDMLASSMNEMVATSN 398

Query: 306 QVEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVELNNQTGQVSS 365
           Q+   T EAS++ +     V +      + +E + NLV  ++  K  I +LN QT  +  
Sbjct: 399 QIAQITSEASEITSKINGQVNEGVGAVSSVTESVGNLVEKLDKTKSVIQDLNRQTQNIDV 458

Query: 366 ILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATGNIENIIAG 425
           IL  I  IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA +T E+T NI +II  
Sbjct: 459 ILKAINDIADQTNLLALNAAIEAARAGENGRGFAVVADEVRSLAIKTQESTKNIGSIIHI 518

Query: 426 FQRDSQASLSSVD---TVCSHAHQRSSE----VEELSAAMTRVVSEMQQVLSHAMGIQEQ 478
            Q +S  S+  +D    + S     S++    ++ +S ++ ++V    QV + A      
Sbjct: 519 LQENSLLSVHVMDESFNIASETMTISADSKQCLDNISQSVIQIVDITNQVATAAYEQSHV 578

Query: 479 TKRTTEVSHEIQNKVDVITHHANNTSQSA 507
           ++     S  I++K D ++   N  SQ A
Sbjct: 579 SEEINSNSISIKDKADTLSSLGNKISQQA 607