Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  153 bits (386), Expect = 2e-41
 Identities = 117/387 (30%), Positives = 189/387 (48%), Gaps = 18/387 (4%)

Query: 158 VLGVIRLEFNLNHLTQMVNHRTLIGVGIMSVIALFGFMLTLFFMRRI----------IVL 207
           +L  IRL F+   L  +V       + I+S+I     M  LF    +          +++
Sbjct: 143 ILPKIRLGFHWK-LILLVWGSLFASIAIVSLIYPSALMSILFLTLLVGSITTLGITYLLV 201

Query: 208 PLQKTSAFMCEVSKSKDLSHRLENDRKDELGQLAVSINSLMDTVSDSLQQVQDTSHSLAD 267
           P+++     C+ S +  LS  L   R DE GQL  ++       S  + ++ D S+ L  
Sbjct: 202 PMKRLIQSYCKDSDNP-LSQVLYTGRSDEFGQLEFALRMAQAETSAVIGRIGDASNQLNK 260

Query: 268 SAKKLTNVAQVTDQAANNQQKETAEVQTNITDMQGKQQQVEFATEEA---SKLVNHTTSI 324
            A  L +  + ++   + QQ ET +V T I +M    Q+V    + A   S+  NH T  
Sbjct: 261 FANDLLHNIEKSNILTSEQQAETEQVATAINEMAASIQEVATGAKHAANSSESANHETIS 320

Query: 325 VQQSAKQAHAASEDIKNLVGDIEAVKQRIVELNNQTGQVSSILGVIKGIAEQTNLLALNA 384
            QQ   QA   S+ I  L  ++   KQ I EL   +  +S +L VI+ IA+QTNLLALNA
Sbjct: 321 GQQIVSQA---SQSITELEHEVSQAKQVIHELEEHSNDISKVLEVIRSIADQTNLLALNA 377

Query: 385 AIEAARAGEQGRGFAVVADEVRHLASRTTEATGNIENIIAGFQRDSQASLSSVDTVCSHA 444
           AIEAARAGE GRGFAVVADEVR LA+RT ++T +I+ +I   Q  ++ +++ ++     A
Sbjct: 378 AIEAARAGESGRGFAVVADEVRGLAARTQQSTMDIQRMIDTLQGRAKLAVAVMEHSSQQA 437

Query: 445 HQRSSEVEELSAAMTRVVSEMQQVLSHAMGIQEQTKRTTEVSHEIQNKVDVITHHANNTS 504
                + ++ + A+T +   +  +   ++ +     + + VS EI + +  I   A+   
Sbjct: 438 LLSVEQAQQAADALTGIGKRVSDITGMSVQMATAVDQQSAVSDEINHSISNIRMAADTNV 497

Query: 505 QSASETREISIDLEHLSQQLESLLNQF 531
            +     + +  +  LS  L  L  QF
Sbjct: 498 DNGKINAKCAEGVAGLSHNLSELAQQF 524