Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  171 bits (432), Expect = 9e-47
 Identities = 105/332 (31%), Positives = 171/332 (51%), Gaps = 1/332 (0%)

Query: 203 RIIVLPLQKTSAFMCEVSKSK-DLSHRLENDRKDELGQLAVSINSLMDTVSDSLQQVQDT 261
           R I  P ++T A +  +++ + DL+ +L    KDEL Q+A + N   + +   +Q++   
Sbjct: 225 RSITQPCEETLATLKNIAQGEGDLTRQLTVTGKDELAQIAQAFNLFTNKIRHIIQEITPI 284

Query: 262 SHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNITDMQGKQQQVEFATEEASKLVNHT 321
           + S+  SA +LT VAQ     A +Q +    V + +  +    Q+V  +  +A +  +  
Sbjct: 285 TESVTGSADELTQVAQSASSKAYDQHQAVDTVASAMNQLHASNQEVAQSAHQAEQAAHSA 344

Query: 322 TSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVELNNQTGQVSSILGVIKGIAEQTNLLA 381
                Q  +     S  +++L   +   +Q    L ++T  VS++L VI+G+AEQTNLLA
Sbjct: 345 NQAASQGREMITLTSTQMQSLRDQLTRTEQETQVLASETQSVSAVLEVIRGVAEQTNLLA 404

Query: 382 LNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATGNIENIIAGFQRDSQASLSSVDTVC 441
           LNAAIEAARAGEQGRGFAVVADEVR LA+RT  +T  IE IIA  Q+ +Q+   S+    
Sbjct: 405 LNAAIEAARAGEQGRGFAVVADEVRTLATRTQASTNEIEQIIAQLQKKAQSVSQSMTQTQ 464

Query: 442 SHAHQRSSEVEELSAAMTRVVSEMQQVLSHAMGIQEQTKRTTEVSHEIQNKVDVITHHAN 501
             +     + E+    +  + ++++ +LS    I   + + +E + EI   +  I  H+ 
Sbjct: 465 QQSRVTQQQAEQAQQMLNEIEAQIKTILSFNQHIAGASAQQSEATDEITRNLTQIAEHST 524

Query: 502 NTSQSASETREISIDLEHLSQQLESLLNQFTL 533
             S  A++    S  L    Q L   L  F +
Sbjct: 525 QASAQANQVAAASEQLMENGQHLARSLAVFKI 556