Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  159 bits (402), Expect = 3e-43
 Identities = 116/359 (32%), Positives = 182/359 (50%), Gaps = 14/359 (3%)

Query: 179 TLIGVGIMSVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSKDLSHRLENDRKDELG 238
           T + +  M V AL  +++TL      I  PL++T A    ++K  DLS      R+DE+G
Sbjct: 299 TSVALLAMVVGALAAWLITLQ-----ITQPLRQTLAVAARIAKG-DLSQVDTVQRRDEMG 352

Query: 239 QLAVSINSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNIT 298
           QL  S+  +  ++ D +  +      L+ +A +L   ++ T    N Q++ET +V T + 
Sbjct: 353 QLQTSMREMTLSLRDLIGGIDQGVGQLSQAATQLAASSEDTKLRINQQREETDQVATAMN 412

Query: 299 DMQGKQQQVEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVELNN 358
            M    Q+V    E+AS    +     Q   +    A   I+ L G ++     +  L  
Sbjct: 413 QMSATVQEVAQNAEQASLAATNADQQAQVGDQVVSEAIGRIEQLAGQMDHCLAAMQHLAG 472

Query: 359 QTGQVSSILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATGN 418
           ++ ++ SIL VIK ++EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT+ AT  
Sbjct: 473 ESQRIGSILDVIKSVSEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTSTATEE 532

Query: 419 IENIIAGFQRDSQASLSSVDTVCSHAHQRSSEVEELSAAMTRVVSEMQQVLSHAMGIQEQ 478
           I  +I      +      +D+  S   Q      ELS      +S++   +S   G+ +Q
Sbjct: 533 IGQLIDSLHNGTDEVTRLLDSSKSLTEQS----VELSRRAGHALSQITDTVSSIQGMNQQ 588

Query: 479 TKRTTE----VSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLESLLNQFTL 533
               +E    V+ +I   V  +   ++ TS ++ +T   S +LE L QQL  ++ +F++
Sbjct: 589 IATASEEQSVVAEQINRSVINVRDVSDQTSAASEQTAASSGELEQLGQQLRGMVGRFSI 647