Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

 Score =  176 bits (447), Expect = 2e-48
 Identities = 119/354 (33%), Positives = 192/354 (54%), Gaps = 15/354 (4%)

Query: 185 IMSVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSKDLSHRLENDRKDELGQLAVSI 244
           I +++AL   +L    + R I  PLQ T   + +++ S DL+  +   R+DELG L   I
Sbjct: 292 IATLLALLVGVLAAVLITRQITRPLQDTLVAVEKIA-SGDLTQHMRVTRRDELGVLQQGI 350

Query: 245 NSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNITDMQGKQ 304
             +  T+ + +  ++D    +A +A++L+ V + T   AN+Q+ ET +V T + +M    
Sbjct: 351 ARMGTTLRELISGIRDGVTQIASAAEELSAVTEQTSAGANSQKVETDQVATAMHEMAATV 410

Query: 305 QQVEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVELNNQTGQVS 364
           Q+V    E+AS          +   +    A   I+ L  D+    + +  L  ++ ++ 
Sbjct: 411 QEVARNAEQASHAATGADDEARAGDRVVGEAIGQIERLAEDMHRSTEAMNLLQQESQKIG 470

Query: 365 SILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATGNIENIIA 424
           S++ VIK +AEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT ++T  IE +IA
Sbjct: 471 SVMDVIKSVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEELIA 530

Query: 425 GFQRDS-------QASLSSVDTVCSHAHQRSSEVEELSAAMTRVVSEMQQVLSHAMGIQE 477
             Q  +       Q S +  D+    A +  S +E +++ ++ + S  QQ+   A   ++
Sbjct: 531 SLQHGTQQVANAMQGSRALTDSSVELARKAGSSLESITSTVSSIQSMNQQI---AAAAEQ 587

Query: 478 QTKRTTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLESLLNQF 531
           Q+    E+S  I N  DV    +  T+ ++ ET   S++L  L  QL++L++QF
Sbjct: 588 QSAVAEEISRSILNVRDV----SEQTAAASDETAASSVELARLGGQLQTLVSQF 637