Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 714 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  157 bits (398), Expect = 1e-42
 Identities = 105/358 (29%), Positives = 183/358 (51%), Gaps = 10/358 (2%)

Query: 179 TLIGVGIMSVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSK-DLSHRLENDRKDEL 237
           TL+ + +    A+ G +L ++ M R +  P+   +A + +++  + DL+ RL   ++DEL
Sbjct: 360 TLLELSLGLAAAIVGLLL-VWLMARGVTRPILGVAAMLKDIASGEGDLTRRLTYQKQDEL 418

Query: 238 GQLAVSINSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNI 297
           G+LA   N  +D +  ++ +V+ +  +   +A + + +A  T      Q ++  +V T  
Sbjct: 419 GELAGWFNRFLDKLQPTIAEVKRSVQAARGTADQSSAIATETSAGMEQQYRQVDQVATAS 478

Query: 298 TDMQGKQQQVEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVELN 357
            +M    Q V  +  +A++         ++        +  I  L  ++      I  L 
Sbjct: 479 HEMSATAQDVARSAAQAAQAARDADQATREGLAVIDRTTSSIGALAANMSDTMAEIEGLA 538

Query: 358 NQTGQVSSILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATG 417
             + ++ S+L VI+ IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RT E+  
Sbjct: 539 QNSEKIGSVLEVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQESVE 598

Query: 418 NIENIIAGFQRDSQASLSSVDTVCSHAH-QRSSEVEELSAAMT---RVVSEMQQVLSHAM 473
               +I   Q  ++  + ++D    H+H Q    VE++  A+T   R+   +  +    +
Sbjct: 599 ETRQVIEALQNGTREVVGAMD----HSHRQAQGGVEQVGQAVTALQRIGQAVTVITDMNL 654

Query: 474 GIQEQTKRTTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLESLLNQF 531
            I    +  + V+ EI + V  I     + S  A+E+  +S  L  L+ Q ++L++QF
Sbjct: 655 QIASAAEEQSAVAEEINSNVATIRDVTESLSGQANESARVSQSLNSLANQQQALMDQF 712