Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  172 bits (435), Expect = 4e-47
 Identities = 114/354 (32%), Positives = 178/354 (50%), Gaps = 6/354 (1%)

Query: 179 TLIGVGIMSVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSK-DLSHRLENDRKDEL 237
           +L+GVGI  ++AL      +  + R I  PLQ+    M  ++  + DL+ RL+    DE+
Sbjct: 194 SLVGVGIALLMAL-----VVMLIARSIARPLQEAVQAMGNIASGESDLTRRLDTHGSDEI 248

Query: 238 GQLAVSINSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNI 297
             L    N     +   + Q+Q  +H+LA SA  + + A    Q +  Q  +  +V T +
Sbjct: 249 THLGEHFNRFNGKLQGVVGQLQGAAHALAQSAGHVGDNAGAAQQRSAQQSLQMDQVATAV 308

Query: 298 TDMQGKQQQVEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVELN 357
            ++    Q V    E+A+  +      V    +  H +   I  L   I+   Q I +L 
Sbjct: 309 NEVTYAVQDVAKTAEQAAGEMRTAQQQVTHGQQAIHGSLAQIDRLSLTIDEAVQVIRDLA 368

Query: 358 NQTGQVSSILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATG 417
             + ++  +L VI+ IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RT ++T 
Sbjct: 369 GHSTRIGGVLDVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTAQSTA 428

Query: 418 NIENIIAGFQRDSQASLSSVDTVCSHAHQRSSEVEELSAAMTRVVSEMQQVLSHAMGIQE 477
            I  +I   Q  S A++ ++DT    + Q   +  E  A++  +   +  + +    I  
Sbjct: 429 EIHTMIEHLQSQSDAAVKAIDTSSEASRQTVEQAREAGASLDAINQVLNNLTALNASIAS 488

Query: 478 QTKRTTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLESLLNQF 531
            T + + V  EI   V      +  T+ +A ++ +  + L  LS++LE LL QF
Sbjct: 489 ATLQQSHVVEEINRNVLDTAGLSQQTADAARQSSDAGVALGRLSEELEQLLRQF 542