Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 688 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  159 bits (401), Expect = 4e-43
 Identities = 105/353 (29%), Positives = 174/353 (49%), Gaps = 6/353 (1%)

Query: 180 LIGVGIMSVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSK-DLSHRLENDRKDELG 238
           LIG+G     A+ G +L ++   R +  P+   +A + +++  + DL+ RL+   +DELG
Sbjct: 339 LIGLGT----AIAGLLL-VWLTARGVTRPILAVAARLEDIASGEGDLTRRLDYAHQDELG 393

Query: 239 QLAVSINSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNIT 298
           QL    N  +D +   + QV+ +     ++A +   +A  T      Q +E  +V T   
Sbjct: 394 QLTGWFNRFLDKLQPVIAQVKGSLQEARNTADQSAAIASQTSDGMQQQHREIEQVATAAN 453

Query: 299 DMQGKQQQVEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVELNN 358
           +M      V     +A++         Q+  +   +  + I  L   +         L +
Sbjct: 454 EMSATALDVAHNASQAAQAARAADQASQEGLQLVDSTRQGIDRLAAGMNTAMDEARALED 513

Query: 359 QTGQVSSILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATGN 418
           ++GQ+ S+L VI+ IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT  +   
Sbjct: 514 RSGQIGSVLEVIRTIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQVSVEE 573

Query: 419 IENIIAGFQRDSQASLSSVDTVCSHAHQRSSEVEELSAAMTRVVSEMQQVLSHAMGIQEQ 478
           I  +I G Q+ +Q  + ++      A   ++ +E+   A+ R+   +  +    + I   
Sbjct: 574 IRQVIEGLQQGTQDVVGAMHAGQRQAQDSAARMEQALPALQRIGEAVAVISDMNLQIASA 633

Query: 479 TKRTTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLESLLNQF 531
            +  + V+ E+   V  I     + +  A E+  IS  L  L+ Q ++L+ QF
Sbjct: 634 AEEQSAVAEEVNRNVAGIRDVTESLAGQADESARISQALNRLANQQQALMEQF 686