Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  161 bits (407), Expect = 8e-44
 Identities = 117/413 (28%), Positives = 200/413 (48%), Gaps = 21/413 (5%)

Query: 122 YQADWGKGIVVALPMKSSENYRGTNCVACHIAPEGEVLGVIRLEFNLNHLTQMVNHRTLI 181
           +  D  + + + LP+      R  N       PE E+            + Q V   +LI
Sbjct: 253 FSRDGERYLALGLPL------RDLNWTLVAEVPESEIYA---------QMHQAVWLTSLI 297

Query: 182 GVGIMSVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEV-SKSKDLSHRLENDRKDELGQL 240
           G G +++++L    L +  + R +V P+++ +A + ++ S + DLSHRL++ R+DELG L
Sbjct: 298 G-GAVALVSL----LLVVLLARGLVRPIRRVTAALVQIGSGAGDLSHRLDDSRQDELGDL 352

Query: 241 AVSINSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNITDM 300
           A   N  +D+    + +V  TS  L  + +++T V   T + +  QQ+ T  V T + +M
Sbjct: 353 ARGFNRFLDSQRSLIGEVLSTSERLRRAVEQVTQVVDNTAERSGRQQEMTEMVATAVHEM 412

Query: 301 QGKQQQVEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVELNNQT 360
               Q +     +A++          Q+ +    +   I+ + GDI      + +L ++ 
Sbjct: 413 GLTVQDIARNAGDAAQASQSARDEALQAREVVQRSIRGIEGMSGDIGKAADAVSQLADEV 472

Query: 361 GQVSSILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATGNIE 420
             V  +L VI+ I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT  +T  ++
Sbjct: 473 ASVDEVLAVIRSISEQTNLLALNAAIEAARAGEMGRGFAVVADEVRTLARRTQLSTDEVQ 532

Query: 421 NIIAGFQRDSQASLSSVDTVCSHAHQRSSEVEELSAAMTRVVSEMQQVLSHAMGIQEQTK 480
            +I   +  + +++SS+              +   A+++ +  +++ +      +   T+
Sbjct: 533 QMIQRLKLGAGSAVSSMQAGQQATGSGVESSQRTGASLSAITDQVEHISDMNHQVATATE 592

Query: 481 RTTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLESLLNQFTL 533
             + V+ EI   V  I+  A  T+      RE    L  L+  L   +  F L
Sbjct: 593 EQSAVTEEINRTVQGISDLARETAAEVQGCREECQALRGLADDLARQMGGFRL 645