Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  161 bits (408), Expect = 5e-44
 Identities = 107/356 (30%), Positives = 181/356 (50%), Gaps = 12/356 (3%)

Query: 180 LIGVGIMSVIALFGFMLTLFFMRRIIVLPLQKTSAFMC-EVSKSKDLSHRLENDRKDELG 238
           +IG+ + + +  F      F + R IV P+++  A  C E     DL+H +  +  DE  
Sbjct: 192 VIGLLVAATVLTFA---CAFLLTRSIVKPIEE--ALKCAEQVADGDLTHVIRAEGTDEAA 246

Query: 239 QLAVSINSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNIT 298
           +L  ++  + D + D+LQQ+  ++  LA +A++L  V   + +    Q  E  +  T +T
Sbjct: 247 RLLRAMARMQDKLRDTLQQIAGSATQLASAAEELNAVTDESARGLQQQNNEIEQAATAVT 306

Query: 299 DMQGKQQQVE---FATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVE 355
           +M    ++V     +T EAS   + +T   +    +   A   I+ + GD++A  + I  
Sbjct: 307 EMTSAVEEVARNAVSTSEASSEASRSTGDGRDLVMETVGA---IERMSGDVQATAKLITH 363

Query: 356 LNNQTGQVSSILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEA 415
           L  Q+  +  +L VI+G+A+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT ++
Sbjct: 364 LAEQSRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQS 423

Query: 416 TGNIENIIAGFQRDSQASLSSVDTVCSHAHQRSSEVEELSAAMTRVVSEMQQVLSHAMGI 475
           T  IE +I   Q  ++ ++ S+ T    A    +       A+  +   + Q+    + I
Sbjct: 424 TSEIERMIGSIQGGTEEAVESMRTSTERAESTLNIARGAGMALDTIAGAVAQINERNLVI 483

Query: 476 QEQTKRTTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLESLLNQF 531
               +   +V+ E+   +  I   +  ++  A +T   S +L  L+  L  L+ +F
Sbjct: 484 ASAAEEQAQVAREVDRNLVNINDLSVQSATGAHQTSAASAELSRLAVDLNGLVARF 539