Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein 4 from Alteromonas macleodii MIT1002

 Score =  167 bits (422), Expect = 1e-45
 Identities = 106/311 (34%), Positives = 163/311 (52%), Gaps = 6/311 (1%)

Query: 224 DLSHRLENDRKDELGQLAVSINSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAA 283
           DL+ R+E   +DE+G+L    N  MD +   ++ V + S  L++ A+ L  V + T +  
Sbjct: 230 DLTVRIETKSEDEIGELVYWFNQFMDKLQGVVRDVVEASLPLSNLAQNLRGVTEETQRTI 289

Query: 284 NNQQKETAEVQTNITDMQGKQQQVEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLV 343
           + QQK     +  +  M G    V  +  +A+   N  T+  ++  +        I+ L 
Sbjct: 290 DVQQKSATNAKRAVDTMSGSVDGVAHSAAQAASDANEATTAAREGRQIVQQTVTSIQQLA 349

Query: 344 GDIEAVKQRIVELNNQTGQVSSILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVAD 403
            ++      I  L + + +V S+L VIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVAD
Sbjct: 350 ENVRETADVIARLESDSNKVGSVLDVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVAD 409

Query: 404 EVRHLASRTTEATGNIENIIAGFQRDSQASLSSVDTVCSHAHQRSSEVE---ELSAAMTR 460
           EVR LASRT ++T  I++ I   Q    A+ S+V+ +     Q +S VE   +  +++  
Sbjct: 410 EVRTLASRTQQSTEEIQSTIEQLQ---NAAHSAVEVMSRGTEQATSSVETANKAGSSLET 466

Query: 461 VVSEMQQVLSHAMGIQEQTKRTTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHL 520
           + S + ++      I   T+    V+ +I   VD I      T+  + E   +  +L  L
Sbjct: 467 ITSTIGRINQMNEQIAHNTEDQRTVAVDIVRHVDEIHERTEQTASRSGELGSMCNELADL 526

Query: 521 SQQLESLLNQF 531
           +Q LES+  QF
Sbjct: 527 AQHLESIAKQF 537