Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., Methyl-accepting chemotaxis protein 4 from Alteromonas macleodii MIT1002

 Score =  167 bits (423), Expect = 9e-46
 Identities = 137/545 (25%), Positives = 256/545 (46%), Gaps = 38/545 (6%)

Query: 9   LLLTLITVFALVLAGSTSYQYWQQKDLIHSVLSEQLHDKASNYFDSLNMMMLTGTMAQKE 68
           +++ LIT+  ++L      ++++        L ++ +D+  +  + ++ M+   + A + 
Sbjct: 14  IIVALITLLFVLLTAVVLNRHYE-------ALKQKSYDENQHLVEVVHTML--SSFAART 64

Query: 69  TLRQKALAQDGIEQVRVIRAPSLNKIYGPGSTDQQPKDEIDQRALQGETI---------- 118
            + +    Q  +E V+ +R    N  +    T       I + AL G+ +          
Sbjct: 65  DVDEATAKQQALEAVKALRYDGSNYFWIQDQTPSMVMHPI-KPALDGQDLRTFKDGNGKA 123

Query: 119 --IEPYQADWGKG---IVVALPMKSSENYRGTNCVACHIAPEGEVLG----VIRLEFNLN 169
             IE  Q    KG   +    P+   E+            P G  +G    +  LE    
Sbjct: 124 FFIEMAQKVKSKGEGFVDYVWPLPGEESPTDKISYVKEFKPWGWTVGSGIYLTNLEKEFA 183

Query: 170 HLTQMVNHRTLIGVGIMSVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSK-DLSHR 228
           HL  ++    L+ + ++ V+        ++ +   IV P+Q+ S  M ++S+ + DL+  
Sbjct: 184 HLRNVIAVFCLVSIVLVVVL--------VYVIGGSIVKPVQEVSERMKDISQGEGDLTRS 235

Query: 229 LENDRKDELGQLAVSINSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQK 288
           L    +DE+ +LA   N   + +  SL  +++  +SL   A+ +   ++ ++  A  Q +
Sbjct: 236 LPETGQDEVTRLARYFNEYTEKMRHSLLGIRENINSLTQQAELVETSSKNSNAQAQTQNE 295

Query: 289 ETAEVQTNITDMQGKQQQVEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEA 348
              +V   + +M  +  +V    + A K  +     VQ  A    +   DI++L  DIE+
Sbjct: 296 NMLQVAAAMEEMTTQINEVSNNADSAEKSTSSARGNVQNGASVVDSTVNDIRSLTSDIES 355

Query: 349 VKQRIVELNNQTGQVSSILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHL 408
           V   + EL  QT  + ++L VI+GIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L
Sbjct: 356 VSSAVTELAAQTESIGAVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTL 415

Query: 409 ASRTTEATGNIENIIAGFQRDSQASLSSVDTVCSHAHQRSSEVEELSAAMTRVVSEMQQV 468
           ASRT ++T  I+ +I   Q ++++++ +V    S + +      + +  +      M ++
Sbjct: 416 ASRTGQSTDEIQAMIEKLQSNAKSAVDAVKVSQSASTKTVDNAIQANQNLQEADRLMTEI 475

Query: 469 LSHAMGIQEQTKRTTEVSHEIQNKVDVITHHANNTSQSASETREISIDLEHLSQQLESLL 528
              +  I   T++  E + E   +++ ++  A+++ ++A E    S  L      +  + 
Sbjct: 476 ADMSSEIARATEQQAEAATEANMRINALSGAADSSLRTADELAAASQALRASCIAIMDIA 535

Query: 529 NQFTL 533
           N+F L
Sbjct: 536 NRFKL 540