Pairwise Alignments

Query, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  164 bits (414), Expect = 1e-44
 Identities = 106/357 (29%), Positives = 190/357 (53%), Gaps = 15/357 (4%)

Query: 185 IMSVIALFGFMLTLFFMRRIIVLPLQKTSAFMCEVSKSK-DLSHRLENDRKDELGQLAVS 243
           I +++    F L   ++   +  PL+  +    ++ + + DL  R+    + E+ +L   
Sbjct: 287 IWALVIAGAFALIGIWLAGTLTKPLESLADVFQQLGRGQGDLRSRIPMPEQKEIARLVEG 346

Query: 244 INSLMDTVSDSLQQVQDTSHSLADSAKKLTNVAQVTDQAANNQQKETAEVQTNITDMQGK 303
            N+ +D +  ++ QV  TSH+L  SA+ +   +  T+ +  +Q+ +T +    +T+M   
Sbjct: 347 FNNFIDHLHGTISQVAKTSHALKASAQDVAKQSHQTENSTKSQRDQTLQAAAALTEMGST 406

Query: 304 QQQVEFATEEASKLVNHTTSIVQQSAKQAHAASEDIKNLVGDIEAVKQRIVELNNQTGQV 363
             +V  +   A++  N  T+      +    A   I  L G I+ V + I  L+  T  +
Sbjct: 407 VNEVAQSATHAAQNANMATTNSAHGREITQRAVHAINGLSGQIQDVSRVIQSLDEHTAAI 466

Query: 364 SSILGVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRHLASRTTEATGNIENII 423
             IL  I+GI+EQTNLLALNAAIEAARAG+ GRGF+VVADEVR LA R  +AT  I+  I
Sbjct: 467 GGILDTIRGISEQTNLLALNAAIEAARAGDHGRGFSVVADEVRTLAQRAAQATDEIQVKI 526

Query: 424 AGFQRDSQASLSSVDTVCSHAHQRSSEVEELSAAMTRVVSEMQQVLSHAMGIQEQTKRTT 483
             FQ+DS++++S +++    +  R+++V   +  + +++ ++ + ++H   +  Q    T
Sbjct: 527 DKFQQDSKSAVSQMES----SRARTTDVVTATNEIDKLLQDIAEEIAHINDVNTQVATAT 582

Query: 484 EVSHEIQNKVDVITHHANNTSQSASETR-------EISIDLEHLSQQLESLLNQFTL 533
           E   E    V+ I+ + N+ S S+ ET         +S  L+ L+Q+L S +++F L
Sbjct: 583 E---EQATVVEDISRNINDISASSEETLNATKILVSVSDKLDELAQELSSEVSRFKL 636