Pairwise Alignments

Query, 466 a.a., asparagine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 599 a.a., aspartate--tRNA ligase from Erwinia tracheiphila SCR3

 Score = 53.1 bits (126), Expect = 2e-11
 Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 5/109 (4%)

Query: 360 PKDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDILDARMREFGIDP----E 415
           P+D+    ++   +     A D++  G  E+ GGS R    ++        GI+     E
Sbjct: 454 PRDMTPEELQKAPETAIANAYDMVINGY-EVGGGSVRIHNGEMQQTVFGILGINQQEQRE 512

Query: 416 HMDWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFPRTPRSA 464
              +  D  ++G  PHAG   G +RLV  +TG  N+RDVI FP+T  +A
Sbjct: 513 KFGFLLDALKFGAPPHAGLAFGLDRLVMLLTGTDNIRDVIAFPKTTAAA 561



 Score = 42.4 bits (98), Expect = 4e-08
 Identities = 55/267 (20%), Positives = 103/267 (38%), Gaps = 28/267 (10%)

Query: 16  VDSEVTVRGWIRTRRDSKAGISFLAIYDGSCFNPIQAVVPNNLNNYDNEVLKLTTGCSVE 75
           V  +VT+ GW+  RRD    + F+ + D      +Q     +         +L     ++
Sbjct: 14  VGQQVTLCGWVNRRRDL-GSLIFIDMRDREGI--VQVFFDPDRQEAFKLASELRNEFCIQ 70

Query: 76  VTGKIVESPASGQAFELAASDVKV----VGWVEDADTYPM-AKTRHSIEYLREVAHLRPR 130
           +TG +       +  E+A  DV+V    +  +  A+  P+ A   +S E   +  +L  R
Sbjct: 71  LTGTVRARDEKNKNGEMATGDVEVFATGLAIINRAEPLPLDANQANSEEARLKYRYLDLR 130

Query: 131 TNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTLDMENLPRT 190
              +    + R  +   + RF  + G+  +  P++T +  EGA +    S +        
Sbjct: 131 RPDMVQRLKTRAAITSFVRRFMDDNGFLDIETPMLTRATPEGARDYLVPSRVHK------ 184

Query: 191 DAGKVDYNQDFFGKETFLTVSGQLNAEAYACA-ISKVYTFGPTFRAENSNTSRHLAEFWM 249
                       GK   L  S QL  +    +   + Y     FR E+    R   EF  
Sbjct: 185 ------------GKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQ-PEFTQ 231

Query: 250 VEPEVAFADLNTVAKLAEDMLKYVFKA 276
           ++ E +F     V  L E M++ ++++
Sbjct: 232 IDVETSFMTAPQVRALMEKMVRQLWQS 258