Pairwise Alignments

Query, 282 a.a., bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 265 a.a., hydrogenase from Pseudomonas simiae WCS417

 Score =  143 bits (361), Expect = 3e-39
 Identities = 93/261 (35%), Positives = 142/261 (54%), Gaps = 8/261 (3%)

Query: 1   MSIISSIHTPIVLTIAGSDSGGGAGIQADIKAISATGGYACSVITAITAQNTQGVSAVFP 60
           M+I SS   P+VL ++G D  GGAG+QADI+A+ A G +A   +TA+T QNT  VS    
Sbjct: 1   MNIYSS--RPVVLCLSGHDPSGGAGLQADIEALLAQGCHAAPTVTALTVQNTVNVSDFRV 58

Query: 61  LPLAVVEQQLDAVFSDIPVLAVKIGMLADAPIIALVAKKLRQYQPKWIVLDPVMISTSGH 120
           L    V  Q +AV  D  V AVK+GML    ++  V + L+ +    +V DPV+ +  G 
Sbjct: 59  LDREWVLAQANAVLGDSEVAAVKLGMLGSTAMVDTVVELLQAHPHLPVVCDPVLRAGGGG 118

Query: 121 HLLAAEAVETLKRELLPLANLITPNLPEAAVLAGMTQQEWQQNPQQGITVLSQLNTPAVL 180
            L   +    ++  LLPL+ + TPNLPEA +LA + +    +  ++ +  +  L     L
Sbjct: 119 SLGKDDVGYAMRERLLPLSLIATPNLPEARILAELPEGTADECAEKLLPYIKHL-----L 173

Query: 181 LKGGHDHQQANSDDLLIQSGDSRHFCAPRIATKNTHGTGCSLSSAIASYLAQGAELVEAV 240
           + GGH  +    + L  + G  + F   R+   + HG+GC+L+SA++  +AQG  LV AV
Sbjct: 174 ITGGHGDEHEVHNRLYSRDGTRQTFTCQRL-PGSYHGSGCTLASALSGRIAQGEGLVSAV 232

Query: 241 DKAKQYIHQAIVHADQLRIGQ 261
             A  Y  + +  A+QL  GQ
Sbjct: 233 QSALNYTWRTLRDAEQLGQGQ 253