Pairwise Alignments

Query, 637 a.a., cyclic nucleotide-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., cyclic nucleotide-binding protein from Pseudomonas simiae WCS417

 Score =  244 bits (624), Expect = 6e-69
 Identities = 175/630 (27%), Positives = 300/630 (47%), Gaps = 30/630 (4%)

Query: 18  QFLQQHPPFDALPNERLPEIAQQIEIAYFRKDTPIIGYKQA-ISDLYLVRSGAVEVYRRH 76
           QFLQ+ PPF+ + N  L  + +Q ++ ++     I+      +   Y+V+ G V   R  
Sbjct: 24  QFLQRFPPFNQMENAHLAFLVEQCQLRFYGPGDSILKPSGGPVEHFYIVKQGRVVGERPD 83

Query: 77  G-ELYNRLTEGSLFGQMGLLTRNQVSFAVTAIEDTLLYCLPEALFHRLHQEFDSFADFV- 134
             E    +T G  F    LL          A EDT    L +  F +L      F DF  
Sbjct: 84  SAETTFEITTGECFPLAALLGERATRTEHKAAEDTFCLQLNKPAFIKLFALSSPFRDFAL 143

Query: 135 --------EVEQAVRLR--QTVAKQKEQNDLITSKVKQLLTRSAPTIDKQASIQQAAQRM 184
                   +V Q V+ +  +T+  Q   N    +++ +L  R   T      +++A   M
Sbjct: 144 RGVSSLLDQVNQQVQQKAVETLGTQYSLN----TRLGELAMRHPVTCSPATPLREAVTLM 199

Query: 185 ADENVSALLILDNQILLDTEDDSTPMVGIVTERDLCRRVLAQGM-DVTQTVSQVMTHEVI 243
            ++ V +++I+D         +    +GI T RDL R+V+A G  D +Q +   MT    
Sbjct: 200 HEQQVGSIVIVD---------ELKAPLGIFTLRDL-RQVVADGTSDFSQPIEGHMTQAPF 249

Query: 244 SLDHNAYVYEAMLAMLRNNVHHLPVLRERQPIGIIDMTDIVRHESQNSLLLVSRIYQQTC 303
            L  +   ++A +AM   ++ H+ ++++++  G++   D+   +  + + L   I     
Sbjct: 250 FLTPDHSAFDAAIAMTERHIAHVCLVKDQRLCGVVSERDLFSLQRVDLVHLARTIRNAPR 309

Query: 304 IDDLAQLANEVKASFVRLVNEDANSHMIGTAMSTIGRAFTQRIIELVEAELGAAPLPYCF 363
           +D+L  +  E+     R++   A+S  I   ++ +      R+IEL  AE G   +P+ +
Sbjct: 310 VDNLVAIRGEIGQLVERMLAHGASSTQITHIITLLNDHTVCRVIELTLAEKGDPGVPFSW 369

Query: 364 VAFGSMGRDEQLIVTDQDNALILD--DRYDVQQHGAYFAQFAELVCRGLDRCGYPLCDGE 421
           + FGS GR EQ + TDQDN ++ D  D  +           A+ + + L  CG+ LC G 
Sbjct: 370 LCFGSEGRREQTLYTDQDNGILFDAKDAAEAAAIRGRLLPLAQQINQSLALCGFSLCKGN 429

Query: 422 IMASNPKWRMTRKEWETCFADWIDNPNPQALLNASIFFDLDGVYGRTKWAEQLSGFIVRR 481
           IMA NP+  ++R EW   FA +I    P+ LL +SI+FDL  V+G  +  EQL   I+ +
Sbjct: 430 IMAGNPELCLSRAEWARRFAAFIREATPENLLGSSIYFDLRVVWGDERGCEQLRQTILDQ 489

Query: 482 ARRNQRFLACLARNALNRTPPLGFFKNFVMEKDGRHNNSINLKRRGTAPLADLIRVHALA 541
              N+ F   LA NAL + PP+G F+ FV+ + G    +++LK +G  P  D  R+ ALA
Sbjct: 490 VADNRLFQRMLAENALRQRPPVGRFREFVLTRKGGEKATLDLKVQGLTPFVDGARLLALA 549

Query: 542 AGSRAKNSFERLDDVIEAGLLPQGKGKDLRDALEFIAMVRIRHQAIDVEQEREADNSIEP 601
            G  A N+ ERL  ++   ++    G    +A  FI   R++   +   + +   N ++P
Sbjct: 550 NGIHANNTLERLRQLVVKEVIEPLDGAAYEEAYHFIQQTRMQQHQLQSRENQPYSNRVDP 609

Query: 602 EHLSDFERRNLKDAFQILSNGQNYLKYRYQ 631
           + L+  +RR L+++ +     Q+ L  RYQ
Sbjct: 610 DSLNHLDRRILRESLRQAQRLQSSLTLRYQ 639