Pairwise Alignments

Query, 637 a.a., cyclic nucleotide-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 622 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  197 bits (501), Expect = 1e-54
 Identities = 152/626 (24%), Positives = 278/626 (44%), Gaps = 37/626 (5%)

Query: 24  PPFDALPNERLPEIAQQIEIAYFRKDTPIIGYKQAISDLYLVRSGAVEVYRRHGELY--- 80
           PPFD L  ++   +A  ++IA + +D  ++  ++    +++V  G V+  RR GE+    
Sbjct: 17  PPFDLLTGDQRTALAGALDIALYPRDAVLLSREEPTDAMFVVLRGTVQE-RRGGEVAAVH 75

Query: 81  ---NRLTEGSLFGQMGLLTRNQVSFAVTAIEDTLLYCLPEALFHRLHQEFDSFADFVEVE 137
              +R    +L+G  G       +    A E+   + +P      L  E   F   +  +
Sbjct: 76  GPGDRFGLQALYGAAGAGAGGSSARRFVAAEECACHLIPRPALEALSAENPEFGAAIIGD 135

Query: 138 QAVRLRQTVA--KQKEQNDLITSKVKQLLTRSAPTIDKQASIQQAAQRMADENVSALLIL 195
            A R+R   A    +E   L  ++++Q        +D  AS++ AA+ M     S++L+ 
Sbjct: 136 FAQRMRDLAALRSNREMAALTMARIRQAYLHPPLFVDAAASLRDAAEAMKQNCASSVLVR 195

Query: 196 DNQILLDTEDDSTPMVGIVTERDLCRRVLAQGMDVTQTVSQVMTHEVISLDHNAYVYEAM 255
                     D T  VGI+T  DL   V+  G  V++ V  +  + +++LD +  ++ A+
Sbjct: 196 GA--------DGT--VGILTGTDLRDLVVLAGRPVSEPVGPLARYGLLTLDRDDLLFNAL 245

Query: 256 LAMLRNNVHHLPVLRERQPIGIIDMTDIVRHESQNSLLLVSRIYQQTCIDDLAQLANEVK 315
           + M ++ V  + V      +G++  +D++   S +S ++  ++   T   DL + +  + 
Sbjct: 246 VLMTKHAVRRVVVTENGAIVGLLGQSDLLAVLSNHSQVIGLQVEHATDPADLRRASRAIV 305

Query: 316 ASFVRLVNEDANSHMIGTAMSTIGRAFTQRIIELVEAELGAAPLPYCFVAFGSMGRDEQL 375
                L         I   ++ + R   +++ EL+      A    C +  GS GR EQL
Sbjct: 306 ELIRTLHATGVKVSFIADLVTELNRRIFRKLFELLAPPDLLANS--CLIVMGSEGRGEQL 363

Query: 376 IVTDQDNALILDDRYDVQQHGAYFAQFAELVCRGLDRCGYPLCDGEIMASNPKWRMTRKE 435
           + TDQDN LIL D +D        A F     R L   GYP C G IM SNP+W      
Sbjct: 364 LKTDQDNGLILRDGFDCPDLADIAADFT----RHLVEFGYPPCPGNIMVSNPEWTRPLAG 419

Query: 436 WETCFADWIDNPNPQALLNASIFFDLDGVYGRTKWAEQLSGFIVRRARRNQRFLACLARN 495
           ++    +W+  P+  A +N +IF+D   V G      +   +++ R + NQ F    AR 
Sbjct: 420 YKDALFNWVHRPDEAAQMNLAIFYDAAPVAGDATLLAEAKDYLLSRLQDNQMFFTQFARP 479

Query: 496 ALNRTPPLGFFKNFVMEKDGRHNNSINLKRRGTAPLADLIRVHALAAGSRAKNSFERLDD 555
           AL+   P G F       + R   ++++K+ G  P+   +R  AL       N+ ER+  
Sbjct: 480 ALSFDTPSGLFAALF---ERRRAEAVDIKKAGIFPIVHGVRALALEKHRVETNTVERIQV 536

Query: 556 VIEAGLLPQGKGKDLRDALEFIAMVRIRHQAIDVEQ--------EREADNSIEPEHLSDF 607
           + E G L +    DL +A   ++ +R++ + +D+          E   DN + P+ L   
Sbjct: 537 LAELGALDRKMAADLVEAFTILSTIRLKAR-VDLPDDGPEGEGAELAIDNLVHPDRLGKL 595

Query: 608 ERRNLKDAFQILSNGQNYLKYRYQAN 633
           +R   KD   ++ + +  + + ++ N
Sbjct: 596 DRDQFKDCLALVKSFKELIAHHFRLN 621