Pairwise Alignments

Query, 236 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., DNA polymerase III subunit epsilon from Pseudomonas simiae WCS417

 Score = 52.0 bits (123), Expect = 1e-11
 Identities = 46/198 (23%), Positives = 80/198 (40%), Gaps = 14/198 (7%)

Query: 19  AQQARQTHLQRFYAQPLVEGSTPIHQCSLVALDFETTGLNAEQDAIVSIGLVPFTTQRIF 78
           AQQ R   L+     P   G+  +     V +D ET+GLN  +D ++SIG V      + 
Sbjct: 17  AQQQRLAQLR----SPTPLGNNTLRNQRWVVVDLETSGLNLNRDQVLSIGAVVIEDGAVD 72

Query: 79  LSQARYWLVKPSQPLEDESIVFHGITHSELQHAQAPEQVLKELLEALHGKIVVVHFRHIE 138
            SQ     ++ ++     S++ HG+  S +     P   L + ++ +    ++      +
Sbjct: 73  FSQLFERTLQRAETKLSPSVLIHGLGPSAIAAGSDPVDALLDFMDFVGDSPLLAFHAPFD 132

Query: 139 RDFLRQISLNIWGEAIEFPVLDTLEIERQLLDKQRSLWQRIARRPLPSIRLGQSRMRYHL 198
           +  L +   +  G  +  P LD  +I   L  +            +    L      ++L
Sbjct: 133 QHMLCRALKDSLGYRLTHPFLDVADIAPLLCPEAH----------IREAGLDDWINHFNL 182

Query: 199 PPYSPHHALTDAIATAEL 216
                HHA  DA+ATAEL
Sbjct: 183 HVGERHHASADALATAEL 200