Pairwise Alignments

Query, 236 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., DNA repair nuclease with dnaQ and GIY-YIG domains (from data) from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 51.6 bits (122), Expect = 3e-11
 Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 15/168 (8%)

Query: 50  LDFETTGLNAEQDAIVSIGLVPFTTQRIFLSQARYWLVKPSQPLEDESIVFHGITHSELQ 109
           +D ETTG    QD I  I +     ++I      + L+ P +P+        GI    + 
Sbjct: 5   VDIETTGGQPHQDKITEIAIFIHDGEKIV--DKYHTLINPERPIPYFITQLTGIKDDMVL 62

Query: 110 HAQAPEQVLKELLEALHGKIVVVHFRHIERDFLRQISLNIWGEAIEFPVLDTLEIERQLL 169
            A    +V KE++E   GK+ V H    +  F+++   ++ G   +   L T+ + R L+
Sbjct: 63  EAPKFYEVAKEIVEFTEGKVFVAHNVRFDYSFMKKEFADL-GFTFQRKTLCTVRLSRSLI 121

Query: 170 DKQRSLWQRIARRPLPSIRLGQSRMRYHLPPYSPHHALTDAIATAELF 217
                         LPS  LG+      +P    H A+ DA ATA LF
Sbjct: 122 P------------GLPSYSLGKLCNSIDIPLSQRHRAIGDAEATALLF 157