Pairwise Alignments

Query, 236 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 268 a.a., DNA polymerase III, epsilon subunit and related 3'-5' exonucleases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 41.6 bits (96), Expect = 2e-08
 Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 26/176 (14%)

Query: 51  DFETTGLNAEQDAIVSIGLVPFTTQRIFLSQARYWLVKPSQPLEDESIVFHGITHSELQH 110
           D E TG+N   D IV + +V          + +   + P+ P+  E  + HGI   +++ 
Sbjct: 13  DLEATGINISTDRIVEVSIVKVHPGGE--EETKTMKINPTIPIPKEVSLIHGIYDKDIKD 70

Query: 111 AQAPEQVLKELLEALHG------KIVVVHFRHIERDFLRQISLNIWGEAIEFPVLDTLEI 164
           A   + V KEL + L G       ++      +  +FLR          I+F +      
Sbjct: 71  APTFKDVAKELHQFLEGADLAGFNVLKFDIPLLVEEFLR--------AGIDFDI-----E 117

Query: 165 ERQLLDKQRSLWQRIARRPLPSIRLGQSRMRYHLPPYSPHHALTDAIATAELFQAQ 220
           +R LLD Q+ ++  + +R L +      +        + H A  D IAT E+F+AQ
Sbjct: 118 KRNLLDAQK-IFHMMEKRNLTA----AYKFYCGKTLENAHSAEADTIATYEVFKAQ 168