Pairwise Alignments

Query, 236 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., DNA repair nuclease with dnaQ and GIY-YIG domains (from data) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 44.3 bits (103), Expect = 4e-09
 Identities = 46/168 (27%), Positives = 69/168 (41%), Gaps = 15/168 (8%)

Query: 50  LDFETTGLNAEQDAIVSIGLVPFTTQRIFLSQARYWLVKPSQPLEDESIVFHGITHSELQ 109
           +D ETTG   ++  I  +  V     +I  S     L+ P   +        GI  S ++
Sbjct: 6   VDIETTGGYGKRHRITEVAAVAHNGSQILDSFQT--LINPDCEIPGFITGLTGIDQSMVE 63

Query: 110 HAQAPEQVLKELLEALHGKIVVVHFRHIERDFLRQISLNIWGEAIEFPVLDTLEIERQLL 169
            A   E +  EL   L  KI V H  + +  F+R     I G++ + P L T+ + R++ 
Sbjct: 64  GAPYFEDIADELYAFLEDKIFVAHNVNFDYQFIRSEFERI-GKSFDRPKLCTVRLSRKIF 122

Query: 170 DKQRSLWQRIARRPLPSIRLGQSRMRYHLPPYSPHHALTDAIATAELF 217
              R            S  LG+     ++   S H A  DA ATAELF
Sbjct: 123 PGLR------------SYSLGRICEHKNIEIKSRHRAFGDAEATAELF 158