Pairwise Alignments

Query, 236 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 213 a.a., DNA polymerase III, alpha subunit (gram-positive type) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 58.5 bits (140), Expect = 1e-13
 Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 6/176 (3%)

Query: 41  PIHQCSLVALDFETTGLNAEQDAIVSIGLVPFTTQRIFLSQARYWLVKPSQPLEDESIVF 100
           PI + S + +D ETTGL+ ++D I++ G +  +  RI +  +R   V  S+     SI  
Sbjct: 22  PISELSFLVVDTETTGLDVKKDHILAFGGIKVSNNRILVQSSREQFVH-SKKKNASSIKI 80

Query: 101 HGITHSELQHAQAPEQVLKELLEALHGKIVVVHFRHIERDFLRQISLNIWGEAIEFPVLD 160
           H I   +  +A +P + ++  L  L   I+V H    +   + +I        +  PV+D
Sbjct: 81  HEIV--QPSNAISPREFVRGFLPYLGSDILVAHHAGFDLAMIEKICYPFGLRKLANPVVD 138

Query: 161 TLEIERQLLDKQRSLWQRIARRPLPSIRLGQSRMRYHLPPYSPHHALTDAIATAEL 216
           T ++  +L   +  +    +R  L    L +   RY++P    H A  DA  TA+L
Sbjct: 139 TGDLAMRL---EHGIHYDPSRINLRDYSLDKLCERYNIPIQDRHTAAGDAFLTAQL 191