Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  248 bits (632), Expect = 8e-70
 Identities = 170/523 (32%), Positives = 278/523 (53%), Gaps = 17/523 (3%)

Query: 126 WYKDAASAGKQIITTAYSDAITGA--LLVTIAEPVRLNGNMSGVVGADVLID--QLIADV 181
           WY       K  +   Y+D + G   L+ TI+ P+ ++GN+ GVVG D+ ++  Q + D 
Sbjct: 190 WYTCPRDTRKVCLLDPYADEVAGKQMLMTTISLPLMVDGNVIGVVGIDIALNTLQAVTDA 249

Query: 182 ISMDAGKNAQTMLIDGQNGSFLAHPDKSLLL-KPVTTLSSALDMRTIERAANQGELLALK 240
              +    A  + I    G   A   +  ++ K +     A     ++  A+   ++  +
Sbjct: 250 AQKELFNGAAHLDILSSTGLIAASSGQPEIVGKTLMDTVGAEGKEIVQLLASDSPMIREQ 309

Query: 241 LNGVEKFFFFTAVPDTP-WYFAVQMDSDTEYASHSELLTGL-------ITTALLI---TV 289
            + +   +    + D   W   V +  +   A   +L   L          ALL+     
Sbjct: 310 DHTIRAVYPVKPIADAKSWGVVVTLPRNVMLADTLKLQDVLDKAQAAGTLKALLVGAAAA 369

Query: 290 IVVVIVSWLVSF-LFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFNTFVSN 348
           ++ +++ WL +  + R +  V+  L++IASGD DLTQRL     DE+G+LA+ FN F+  
Sbjct: 370 LLGLLLIWLTATGVTRPINNVAAMLKDIASGDGDLTQRLAYAKKDELGELANWFNRFLDK 429

Query: 349 MHTMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGN 408
           +   + ++          +  ++A A + S  +++Q  EI+ VATA NEM+A   ++A +
Sbjct: 430 LQPTIAQIKQSITEARGTADQSSAIARQTSEGMQVQFREIDQVATASNEMSATAHDVANS 489

Query: 409 ADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTI 468
           A + A  A  A  +   G   + Q+ R I SLAEEV  A   ++ L  +  QI ++L  I
Sbjct: 490 ASNAASAARGADQSAREGMSIIEQSTRDITSLAEEVSKAVGEVEALAVNSEQIGSVLEVI 549

Query: 469 QNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATT 528
           ++IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR L++RT  S +EI+ +IE +Q+ T
Sbjct: 550 RSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRNLAKRTQDSVEEIRLVIERIQSGT 609

Query: 529 GKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEIT 588
              V  M  S+  A ++    ++A+ +L +I   V  ISDM  QIASAAE+Q++V  E+ 
Sbjct: 610 RGVVATMHSSQSQAQSNAGQIHQAAQALGKISDAVTVISDMNLQIASAAEQQSAVAEEVN 669

Query: 589 RNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631
           RN   IR V+  L  +A  +A  +++L+ L+ +  + + +F++
Sbjct: 670 RNVSAIRTVTETLTGQATESAAISSQLNALASQQMKLMDQFRV 712