Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  264 bits (674), Expect = 1e-74
 Identities = 187/535 (34%), Positives = 272/535 (50%), Gaps = 14/535 (2%)

Query: 101 GTTDGAMYRSHPERNRADYDPRTRPWYKDA-ASAGKQIITTAYSDAITGALLVTIAEPVR 159
           G  DG   +   +   A YDPRTRPWYK A AS GK + T AY        LV  A  + 
Sbjct: 119 GLEDGTYAKWPDDPQLAKYDPRTRPWYKAAMASPGKTVRTPAYYYDKDDVALVGTARALL 178

Query: 160 LNGNMSGVVGADVLIDQLIADVISMDAGKNAQTMLIDGQNGSFLAHPDKSLL-LKPVTTL 218
            NG   GV    V +  L   V S+  G++   ML++  +G  L  P  +    KP+  L
Sbjct: 179 ENGKAKGVFVVSVSLKNLTELVKSIKLGESGYVMLVE--DGVVLVDPRNAAHNFKPLKGL 236

Query: 219 SSALDMRTIERAANQGELLALKLNGVEKFFFFTAVPDTPWYFAVQMDSDTEYASHSELLT 278
            +A      + A        + ++GV         P   W + + +    E  + +  +T
Sbjct: 237 GAAY----AQLAETPQGSTDVVIDGVHYMANVWTSPGLGWRY-IGLIEHREVMAEATRMT 291

Query: 279 GLITTALLITVIVVV---IVSWLVSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEV 335
            L  TAL++ V+V++   I +     + + +G+VS  L+ IA G+ DL   L+ +  DE 
Sbjct: 292 YL--TALIVGVLVLIFGLIAAAFSKVIVKPIGQVSTGLQSIAQGEGDLRHELQVQGKDET 349

Query: 336 GQLASNFNTFVSNMHTMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAI 395
            +LA  FN F++ +  ++  +   SA L   SKV +  A   +     Q++ + +V+TA 
Sbjct: 350 AELAGWFNKFLAAIRQLIQHIGAASANLQNASKVNSEVAHNMNEAAGRQREAVELVSTAF 409

Query: 396 NEMAAATQEIAGNADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELE 455
           NEM A   E+A +    A++A         G  Q+  T  ++  L   +  +++ + ELE
Sbjct: 410 NEMVATANEVARSCSGAAESAENGHRRVAEGKQQIEVTTDNVNRLGRRLTESSQAMVELE 469

Query: 456 AHGHQISTILSTIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTK 515
           A    I+ IL TI+ IAEQTNLLALNAAIEAARAG+QGRGFAVVADEVR L++RT  ST 
Sbjct: 470 AGSRSINQILGTIRAIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRALAKRTSDSTG 529

Query: 516 EIQQMIETLQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIAS 575
           EI+Q++ TL+  T +    M     L+  SV     A  S E I  +V  I D   QI++
Sbjct: 530 EIEQLLGTLENKTQEVTQKMGSCLDLSRASVSSIESARDSFEGIQTSVNEIRDQNLQISA 589

Query: 576 AAEEQASVTSEITRNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFK 630
           AAEEQ SV  EI R+   I D +  +   A+SA + +  LS LS EL   + RFK
Sbjct: 590 AAEEQHSVAEEINRHIQQIYDEARLVESLANSAQDDSGRLSNLSDELNGLVGRFK 644