Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  279 bits (714), Expect = 2e-79
 Identities = 188/534 (35%), Positives = 285/534 (53%), Gaps = 10/534 (1%)

Query: 101 GTTDGAMYRSHPERNRAD-YDPRTRPWYKDAASA-GKQIITTAYSDAITGALLV-TIAEP 157
           G  DG  Y S P+  + + YDPR RPWY+ A +A GK + T AY  A     L+ T+   
Sbjct: 119 GLKDGG-YASWPDDTKLNNYDPRVRPWYQAAIAAPGKTVRTGAYYWAPDDVTLIGTVHTV 177

Query: 158 VRLNGNMSGVVGADVLIDQLIADVISMDAGKNAQTMLIDGQNGSFLAHP-DKSLLLKPVT 216
               GN+ GVVG DV + QL   V ++  G +   ML++G NG+ L  P D     KP+ 
Sbjct: 178 ADATGNILGVVGLDVSLKQLTELVRNIKLGDSGYLMLVEG-NGNVLVDPSDAKHNFKPLA 236

Query: 217 TLSSALDMRTIERAANQGELLALKLNGVEKFFFFTAVPDTPWYFAVQMDSDTEYASHSEL 276
            L         E A     +  ++++GV       +  D  W F   +  D   A  + L
Sbjct: 237 DLGP----NYAELAKRGDGVTQIEIDGVAYMANMVSSKDLGWRFIGLIKRDEVMAGATRL 292

Query: 277 LTGLITTALLITVIVVVIVSWLVSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVG 336
              +   A ++ ++  ++ +   S + R +  V+  L+EIA G+ DLT++L+ +  DE  
Sbjct: 293 TWLIAAIAAVLALVFAIVGASFASVIVRPIRGVADGLQEIAEGEGDLTRQLKVQGKDETA 352

Query: 337 QLASNFNTFVSNMHTMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAIN 396
            LA  FN F+S +  +V ++ + S+ L   +  T   A   +     Q++ + +V+TA N
Sbjct: 353 SLAGWFNQFLSMIAQLVQRIGNASSDLQSAAADTREVAHNMNQAAGRQREAVELVSTAFN 412

Query: 397 EMAAATQEIAGNADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEA 456
           EM A   E+A +    A +A E       G   + +   S+  L+E++Q +T+ +Q+LE 
Sbjct: 413 EMVATANEVARSCSAAATSADEGYRDVHDGQQHIGEATGSVLKLSEDLQRSTQTMQQLEQ 472

Query: 457 HGHQISTILSTIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKE 516
               I+TIL TI++IAEQTNLLALNAAIEAARAG+QGRGFAVVADEVR L++RT  ST E
Sbjct: 473 DSKNINTILDTIRSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRALARRTADSTGE 532

Query: 517 IQQMIETLQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASA 576
           I  ++  L   T +    M  S  ++ TSV+   +A  S ++I  +V+ I D  TQIA+A
Sbjct: 533 IDSLLGNLARRTQEVTQQMQGSLLVSHTSVERIQQARDSFDKIRGSVDSIRDQNTQIATA 592

Query: 577 AEEQASVTSEITRNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFK 630
           AEEQ  V  EI R+   I   +  +   AHSA   +  L+++S +L+  + RFK
Sbjct: 593 AEEQHQVAEEINRHIAQIHADAQLVEGFAHSAQTGSGRLTDISGQLKGLVGRFK 646