Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 715 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  246 bits (629), Expect = 2e-69
 Identities = 181/540 (33%), Positives = 281/540 (52%), Gaps = 42/540 (7%)

Query: 122 RTRPWYKDAASAGKQIITTAYSDAITG--ALLVTIAEPVRLNGNMSGVVGADVLIDQLIA 179
           +   W+    +  K  +   Y   I G   L+ +I  P+  NG +   +  D+ ++ L A
Sbjct: 188 KANAWFTCPRTLLKPCVIEPYFYRINGQNVLMTSIVFPLMANGKVIASLSVDINLNSLQA 247

Query: 180 DVISMDAGKNAQTMLIDGQNG-SFLA--------HPDKSLLLKPVTTLSSALDMRTIERA 230
                   + A   L DGQ   S L+         PD S L + +  + +A   + I   
Sbjct: 248 ------VSQQASQKLYDGQTQVSILSPTGLLAGYSPDASKLSQRLDQVDTANGAQLIGAL 301

Query: 231 ANQGELLALKLNGVEKFFF-FTAVPD-TPW----------------YFAVQMDSDTEYAS 272
           A+   + +L+ +   K    F  +P+  PW                    QMD++    +
Sbjct: 302 ASSTHIRSLRTDHQLKVLAPFAPIPEGKPWGVLLDVPEKVLVGPAEALKAQMDAENTRGT 361

Query: 273 HSELLTGLITTALLITVIVVVIVSWLVS-FLFRDLGRVSKALEEIASGDADLTQRLEPRS 331
             EL  GL+        +V +I+ WL++  + R +  V+  LE+IASG+ DLT+RL    
Sbjct: 362 LLELGLGLLAA------VVGLILVWLMARSVTRPILGVAHMLEDIASGEGDLTRRLAYDK 415

Query: 332 DDEVGQLASNFNTFVSNMHTMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMV 391
            DE+GQLA  FN F+  +  ++ ++          +  +AA A + S+ +  Q  +++ V
Sbjct: 416 QDELGQLAGWFNRFLDKLQPIIAEVKRSVQDARGTADQSAAIATQTSAGMEQQYRQVDQV 475

Query: 392 ATAINEMAAATQEIAGNADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVI 451
           ATA +EM+A  Q++A +A   AQ A +A  A   G   +  T  +I +LA ++  A   +
Sbjct: 476 ATASHEMSATAQDVARSAAQAAQAARDADQATRDGLTVIEHTTHNIGALASDMSTAMTQV 535

Query: 452 QELEAHGHQISTILSTIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTH 511
           + L A+  +I ++L  I+ IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR L+QRT 
Sbjct: 536 EGLAANSEKIGSVLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQ 595

Query: 512 ASTKEIQQMIETLQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMAT 571
            S +E + +IE LQ  T   VG M +S R A  SV+   +A  +L QI   V  ISDM  
Sbjct: 596 ESVEETRLVIEHLQNGTEAVVGSMGNSYRQAQGSVEQVGQAVTALRQIGDAVTVISDMNL 655

Query: 572 QIASAAEEQASVTSEITRNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631
           QIASAAEEQ++V  EI  N   IRDV+  L+++A+ +A  +  L+ L+++ +  + +F++
Sbjct: 656 QIASAAEEQSAVAEEINNNVATIRDVTESLSEQANESARVSQALNSLANQQQGLMDQFRV 715