Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  514 bits (1323), Expect = e-150
 Identities = 284/630 (45%), Positives = 393/630 (62%), Gaps = 4/630 (0%)

Query: 5   MKLTLKHKLIGASLSAVVVMATALTWFSASQLQQQTSNAVYTRADAISSTAAKGISDWIS 64
           M+L+LK K++ + + A+ V A AL        ++ +  A+ + +       AKGI DW  
Sbjct: 11  MRLSLKRKMVFSVVVAIAVTAAALVAAGYQTFEKDSWRAIESESRNTLQAHAKGIGDWFL 70

Query: 65  IRKSISTAFNAHIEAQ---NVVPYLQQARNAGGFDDIFYGTTDGAMYRSHPERNRADYDP 121
            ++         IE      +VP+L+Q   +G F   +YG   G M+R  P  N ADYDP
Sbjct: 71  GKQLALKGLREEIERNPQLELVPHLRQTLQSGSFGLSYYGNEQGEMFRQDPSLNTADYDP 130

Query: 122 RTRPWYKDAASAGKQIITTAYSDAITGALLVTIAEPVRLNGNMSGVVGADVLIDQLIADV 181
           R R WYK+A +AGK I T  Y       L+VT+AEPVR  G + GV  +++ +D+LI DV
Sbjct: 131 RVRGWYKEAKAAGKPITTEPYVSVTMQTLVVTLAEPVRYQGQLIGVAASNLALDKLIKDV 190

Query: 182 ISMDAGKNAQTMLIDGQNGSFLAHPDKSLLLKPVTTLSSALDMRTIERAANQGELLALKL 241
           ++++       +L++ Q G  +AHP + L+LKP   +S+ L +  +  AA    L  L +
Sbjct: 191 LAIEVPGKGYAILVN-QKGKIVAHPTQDLILKPTEEMSAQLTISKLNIAAKDHSLFQLSM 249

Query: 242 NGVEKFFFFTAVPDTPWYFAVQMDSDTEYASHSELLTGLITTALLITVIVVVIVSWLVSF 301
           +G +K      V +T W   + MD        +++L   I   L I +++ ++ SW V+ 
Sbjct: 250 DGRDKVLMAEEVANTDWLLVMVMDKGVLEQPLNDMLMVQIGIGLGILLVMALLTSWFVAR 309

Query: 302 LFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFNTFVSNMHTMVLKLSHVSA 361
              +LG ++ AL +IA GD DLT+RL+ RS DEVG LA  FN FV  +H MV  +  VS 
Sbjct: 310 QLNELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVDRLHQMVKNVREVSV 369

Query: 362 ALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGNADHTAQNAGEAVT 421
           AL Q +   AA A + S RIR QQDEI MVATA+ EMA+AT EIA NA++TA+NA ++V 
Sbjct: 370 ALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEIASNAENTAKNATQSVQ 429

Query: 422 ACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTIQNIAEQTNLLALN 481
               G  Q+ Q+++SI  LA+E+  A  +I ELE H ++ISTILSTI+ IAEQTNLLALN
Sbjct: 430 LGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILSTIRGIAEQTNLLALN 489

Query: 482 AAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATTGKAVGIMDDSRRL 541
           AAIEAARAGEQGRGFAVVADEVRVLSQRTHAST+EIQ  I  LQ  T  AV +M +S +L
Sbjct: 490 AAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKVTTTAVSVMTESHKL 549

Query: 542 ADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEITRNTVGIRDVSNDL 601
            +TSV D N+   SL+ I + +++ISDMATQIASAAEEQ+ VT++I  NT  +R+VS+ L
Sbjct: 550 VETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADINVNTESVREVSDQL 609

Query: 602 AQEAHSAAEQAAELSELSHELEQEIRRFKL 631
           A+EA  + +QA  L  ++ EL +EI RFKL
Sbjct: 610 AEEAQQSVQQAKSLHAMAQELNKEISRFKL 639