Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  342 bits (877), Expect = 3e-98
 Identities = 220/633 (34%), Positives = 348/633 (54%), Gaps = 17/633 (2%)

Query: 7   LTLKHKLIGAS---LSAVVVMATALTWFSA-SQLQQQTSNAVYTRADAISSTAAKGISDW 62
           +   HK++ AS   L A V + +   +F    +++   S++V    D +S T A+ I+  
Sbjct: 1   MKFSHKIVAASSVLLLATVALLSGSQYFKVRDEIRSMVSDSVDEIVDGVSKTTAEVINGR 60

Query: 63  ISIRKSISTAFNAHIEAQNVVPYLQQARNAGGFDDIFYGTT-DGAMYRSHPERNRAD-YD 120
            SI +  ++    + E  NV   + Q      F  + +G   DG+   + P  N    +D
Sbjct: 61  KSIAQYATSLIENNPEPDNVRTIISQPLIKNTFLLVGFGLEKDGSNINNDPSWNPGPTWD 120

Query: 121 PRTRPWYKDAASAGKQIITTAYSDAITGALLVTIAEPVR--LNGNMSGVVGADVLIDQLI 178
           PR RPWYKDA +AGK +IT  Y+D+ +G +LV++A PV+    G   G +  DV + +L 
Sbjct: 121 PRVRPWYKDAKNAGKLVITAPYADSASGEILVSVATPVKDSATGQFLGSIFYDVSLAEL- 179

Query: 179 ADVISMDAGKNAQTMLIDGQNGSFLAHPDKSLLLKPVTTLSSALDMRTIERAANQGELLA 238
           A++++     +A  + I  ++G+ +AHP K    KP   +S  L    I    +Q     
Sbjct: 180 AELVNEVKLFDAGYVFIVSEDGTTIAHPKKEFNGKP---MSEFLGESKINVDTHQ----- 231

Query: 239 LKLNGVEKFFFFTAVPDTPWYFAVQMDSDTEYASHSELLTGLITTALLITVIVVVIVSWL 298
           + +NG      F+ V    WY  V +D +  YA+  EL    +   ++  VI V ++ ++
Sbjct: 232 VIINGKPYAVSFSDVEGEDWYVGVVIDEEIAYAALDELRRSTLIFTVIALVISVFVLLFI 291

Query: 299 VSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFNTFVSNMHTMVLKLSH 358
           V  L + L  ++ A++ +ASG+ DLTQRL   +D+E  +LA  FNTF   +   +++   
Sbjct: 292 VRVLMKPLDTLNDAIQNVASGEGDLTQRLSTNTDEEFAKLAIGFNTFTETLQKQLIQSKA 351

Query: 359 VSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGNADHTAQNAGE 418
           + A + + S+ T+   ++ +  +R Q  E+  +ATA++EMA  + ++A NA   A  A  
Sbjct: 352 IGAEILRGSESTSMTLQQSAEAMRSQLHELEQLATAMHEMATTSSDVANNAQGAASAAKV 411

Query: 419 AVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTIQNIAEQTNLL 478
           A  A   G   VT+T ++I +L+  +  A + ++ LE+    I T+L  I +IA+QTNLL
Sbjct: 412 ADDAAAAGTDVVTKTTKAIDTLSATIDAAVDDVKVLESATANIETVLKVINDIADQTNLL 471

Query: 479 ALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATTGKAVGIMDDS 538
           ALNAAIEAARAGE GRGFAVVADEVR L+QRT  ST EI+ MIE LQ+        M  S
Sbjct: 472 ALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEKLQSGANAVAVAMSHS 531

Query: 539 RRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEITRNTVGIRDVS 598
           +  A ++V+ A  A+ +LE+I   +++ISDM  QIASAAEEQ+ V  EI  NTV I+D+S
Sbjct: 532 KDTAASAVNQAQGANEALEKIRLAIQQISDMNIQIASAAEEQSLVAEEINNNTVKIKDLS 591

Query: 599 NDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631
           + +A+ A  A       +E   E +  + +FK+
Sbjct: 592 DQVAESADEANMSMQIQTENIREQDAILNKFKV 624