Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  313 bits (802), Expect = 1e-89
 Identities = 206/610 (33%), Positives = 318/610 (52%), Gaps = 16/610 (2%)

Query: 7   LTLKHKLIGASLSAVVVMATALTWFSASQLQQQTSNAVYTRADAISSTAAKGISDWISIR 66
           +    K++ AS + ++ +   L++   S ++++  + V      +       I   ++ +
Sbjct: 1   MRFSQKIVAASSALLLCVIALLSFQQLSTVREEIESLVQDSLMEMVKGVKNTIESDLASK 60

Query: 67  KSI--STAFNAHIEAQNVV---PYLQQARNAGGFDDIFYGTTDGAMYRSHPE--RNRADY 119
           K +  ST     ++  N       L+     G F  I  G    A    + +     ADY
Sbjct: 61  KGLAQSTTEILQLDPTNKAFAKSVLESPNLKGSFLAIGLGYESDATVVENDDGWEPNADY 120

Query: 120 DPRTRPWYKDAASAGKQIITTAYSDAITGALLVTIAEPVRLNGNMSGVVGADVLIDQLIA 179
           DPR RPWY DA    K ++T  Y D  T  ++++I  PV    N  G +  DV + QL  
Sbjct: 121 DPRKRPWYVDAKRERKLVVTEPYVDISTKKIIISIGTPVYQQSNFVGAMFYDVELTQLAQ 180

Query: 180 DVISMDAGKNAQTMLIDGQNGSFLAHPDKSLLLKPVTTLSSALDMRTIERAANQGELLAL 239
            V S++   +A  + I  ++G  +AHP+     +  +     +D++   +         +
Sbjct: 181 LVNSVNLF-DAGYLFITTKDGVTIAHPNAENNGEKFSQFLPNVDLKEGTQR--------I 231

Query: 240 KLNGVEKFFFFTAVPDTPWYFAVQMDSDTEYASHSELLTGLITTALLITVIVVVIVSWLV 299
           +L+G      F  VP   WY    +D    +A   +L    +   ++  ++ ++ +S+L+
Sbjct: 232 ELDGKYYLVKFAQVPSESWYIGAVVDESIAFAMVDDLRHSSLIYTVIGVLLSIIGLSFLI 291

Query: 300 SFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFNTFVSNMHTMVLKLSHV 359
             L + LG +S+A+E++ASG  DLT+RL+  +D E   LA +FN F   +   +  L  +
Sbjct: 292 KVLMKPLGALSRAIEDVASGQGDLTKRLDTNTDMEFAILAKDFNVFCETLQKRIQHLKGI 351

Query: 360 SAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGNADHTAQNAGEA 419
            A +   ++ T   A E +S +  Q  E+  +ATA++EMA    E+A NA   A  A EA
Sbjct: 352 GAEIMHGTEQTVLGAHESASAMAQQLQELEQLATAMHEMAVTATEVANNAQGAAAAAHEA 411

Query: 420 VTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTIQNIAEQTNLLA 479
             A   G+  V+ T RSI +L+  ++ A E ++ LE     I TIL  I +IA+QTNLLA
Sbjct: 412 DEASQDGSKVVSDTTRSIDALSARIEQAVEEVKGLEVATGNIETILKVINDIADQTNLLA 471

Query: 480 LNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATTGKAVGIMDDSR 539
           LNAAIEAARAGE GRGFAVVADEVR L+QRT  ST EI+ MIE LQ+        M++S+
Sbjct: 472 LNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEQLQSGASAVSAAMNESK 531

Query: 540 RLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEITRNTVGIRDVSN 599
             AD +V  A  A+ SL++I   ++RISDM  QIASAAEEQ+ V  EI  NTV I+D+S 
Sbjct: 532 YTADDAVQKAQLANESLQRIRGAIQRISDMNMQIASAAEEQSLVAEEINTNTVKIKDLST 591

Query: 600 DLAQEAHSAA 609
            +A  A SA+
Sbjct: 592 QVADSAKSAS 601