Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  239 bits (609), Expect = 3e-67
 Identities = 174/638 (27%), Positives = 310/638 (48%), Gaps = 27/638 (4%)

Query: 5   MKLTLKHKLIGASLSAVVVMATALTWFSA----SQLQQQTSNAVYTRADAISSTAAKGIS 60
           MK ++K  +I  S+  ++ +++ LT+F        L +   + +    D++       I 
Sbjct: 1   MKFSIKLLMIFTSI--IITISSILTYFQMHGTNEYLDRTIKDTISETLDSLEDKINLSIE 58

Query: 61  DWISIRKSISTAFNAHIEAQNVVPYLQQARNAGGFDDIF--YGTTD---GAMYRSHPE-R 114
             + + KS+   +   +E ++ +   +   +     ++F  +G  D   G +  + P  +
Sbjct: 59  SKVDVSKSVIDIYENLLEGESPLSKFKDV-DVNHLSNVFQLFGYADERTGEIITNDPNFK 117

Query: 115 NRADYDPRTRPWYKDAASAGKQIITTAYSDAITGALLVTIAEPVRLNGNMSGVVGADVLI 174
               +DPRTR WY +A       ++  Y D IT  L+VT + P+    +++GV+  D+ +
Sbjct: 118 VPTGFDPRTRSWYLNAKKLNTFSLSEPYVDLITEKLMVTTSAPIYNKNDLTGVIFFDIPL 177

Query: 175 D---QLIADVISMDAGKNAQTMLIDGQNGSFLAHPDKSLLLKPVTTLSSALDMRTIERAA 231
           D   +LI      DAG    T+ I   +G  +      +  K +     +  +   E   
Sbjct: 178 DDVQELIKSYNPFDAG----TIFIVDNSGKIIFGNKNDISGKNLFGDFDSFPLSVSESKT 233

Query: 232 NQGELLALKLNGVEKFFFFTAVPDTPWYFAVQMDSDTEYASHSELLTGLITTALLITVIV 291
                     NGV             W     +D D   +    L    I TA+++  + 
Sbjct: 234 KDK-------NGVNYDVLIKMSDFGGWNLVSIIDHDKARSDIITLRNNSIFTAVILASVF 286

Query: 292 VVIVSWLVSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFNTFVSNMHT 351
             I+ + +  + + L +++ A+  I+SG ADLT R+   +D E  ++ ++FN FV N+ +
Sbjct: 287 FAILLFTMRLMLKPLHQLTDAMVNISSGSADLTVRIPNSTDQEFSKIINSFNIFVGNLQS 346

Query: 352 MVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGNADH 411
           +V ++   S  +   +  T    E  ++ +  Q  E++M+A+++NEM A + +IA     
Sbjct: 347 IVSEVKMNSEKINCITTETQELVEVCNNSVADQYRELDMLASSMNEMVATSNQIAQITSE 406

Query: 412 TAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTIQNI 471
            ++   +       G G V+    S+ +L E++     VIQ+L      I  IL  I +I
Sbjct: 407 ASEITSKINGQVNEGVGAVSSVTESVGNLVEKLDKTKSVIQDLNRQTQNIDVILKAINDI 466

Query: 472 AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATTGKA 531
           A+QTNLLALNAAIEAARAGE GRGFAVVADEVR L+ +T  STK I  +I  LQ  +  +
Sbjct: 467 ADQTNLLALNAAIEAARAGENGRGFAVVADEVRSLAIKTQESTKNIGSIIHILQENSLLS 526

Query: 532 VGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEITRNT 591
           V +MD+S  +A  ++  + ++   L+ I ++V +I D+  Q+A+AA EQ+ V+ EI  N+
Sbjct: 527 VHVMDESFNIASETMTISADSKQCLDNISQSVIQIVDITNQVATAAYEQSHVSEEINSNS 586

Query: 592 VGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRF 629
           + I+D ++ L+   +  ++QA     L    +  I +F
Sbjct: 587 ISIKDKADTLSSLGNKISQQAYSQKALIGHQDDLISKF 624