Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

 Score =  304 bits (779), Expect = 7e-87
 Identities = 201/637 (31%), Positives = 324/637 (50%), Gaps = 19/637 (2%)

Query: 5   MKLTLKHKLIGASLSAVVVMATALTWFSASQLQQQTSNA-VYTRADAISSTAAKGISDWI 63
           M L  +HK++  S   VVV+A AL       LQ+ T    +        +  A  + +W+
Sbjct: 16  MNLKFRHKIL-LSACGVVVLAFALFTLYNDYLQRNTIRQNIEASVQQSGALTASSVQNWM 74

Query: 64  SIR----KSISTAFNAHIEAQNVVPYLQQARNAGGFDDIFYGTTDGAMYRSHPERNRADY 119
           S R    ++++           +   ++Q      F   + G  +G   +    +  A Y
Sbjct: 75  SGRILVLENLAQDIGQQGAGDTLAGLIEQPSYTRNFLFTYLGQANGEFTQRPDAQMPAGY 134

Query: 120 DPRTRPWYKDAASAGKQIITTAYSDAITGALLVTIAEPVRL--NGNMSGVVGADVLIDQL 177
           DPR RPWY  AA+AG+ ++T  Y  A+ G L+VTIA PV+   NG + GVVG DV +D L
Sbjct: 135 DPRQRPWYGAAANAGQTVLTAPYQGAV-GGLMVTIATPVKSKRNGELIGVVGGDVTLDTL 193

Query: 178 IADVISMDAGKNAQTMLIDGQNGSFLAHPDKSLLLKPVTTLSSALDMRTIERAANQGELL 237
           +  + S+D G      L D  NG  +  P+K  ++K +  +    ++R    AA   ++ 
Sbjct: 194 VEIINSVDFGGIGHAFLADA-NGQVIVSPNKDQVMKNLKDIYPGSNLRV---AAGMQDVT 249

Query: 238 ALKLNGVEKFFFFTAV---PDTPWYFAVQMDSDTEYASHSELLTGLITTALLITVIVVVI 294
              L+G ++   F  V   P   WY  + +D D  YA+ S+  T  I   L+    +  +
Sbjct: 250 ---LDGQDRIISFAPVAGLPSAQWYIGLSIDRDKAYAALSQFRTSAIIAMLIAVAAIAGL 306

Query: 295 VSWLVSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFNTFVSNMHTMVL 354
           +  L+  L   L  + +A+ +IA G+ DLT+RL  ++ DE G+LA++FN FV  +H  + 
Sbjct: 307 LGLLIPVLMSPLTTMGRAMRDIAEGEGDLTRRLAVQNKDEFGELATSFNRFVERIHASIS 366

Query: 355 KLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGNADHTAQ 414
           ++S  +  +   S+   + +         Q    N VA AINE+ AATQEIA NA   +Q
Sbjct: 367 EVSSATRLVHDLSEKVVSASNASIIGSEEQSMRTNSVAAAINELGAATQEIARNAADASQ 426

Query: 415 NAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTIQNIAEQ 474
           +A  A      G   V +   ++ +L++ +  +   I+ L A   +I  IL  I+ I++Q
Sbjct: 427 HASGASEQAHGGREVVEEAISAMTALSQRISESCAQIETLNASTDEIGKILDVIKGISQQ 486

Query: 475 TNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATTGKAVGI 534
           TNLLALNAAIEAARAGE GRGFAVVADEVR L+ RT  S +EI +MI +LQ  + +AV  
Sbjct: 487 TNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHRMITSLQVGSREAVHT 546

Query: 535 MDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEITRNTVGI 594
           M+ S+  ++ +V  AN+A   L  + + +  I  M   +A+A EEQ +V   +  +   I
Sbjct: 547 MNTSQVSSEQTVQVANQAGERLASVTQRIGEIDGMNQSVATATEEQTAVVESLNLDITQI 606

Query: 595 RDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631
             ++    +  +       +L++ +  L+Q +  F++
Sbjct: 607 NALNQQGVENLNETLRHCDQLAQQAGRLKQLVGSFRI 643