Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  255 bits (651), Expect = 5e-72
 Identities = 180/605 (29%), Positives = 293/605 (48%), Gaps = 23/605 (3%)

Query: 34  SQLQQQTSNAVYTRADAISSTAAKGISDWISIRKSISTAFNAHIEAQNVVPYLQQARNAG 93
           + +++     +   AD   +T  +   DW++  +  +       +A   + YL  A+   
Sbjct: 57  NDIERMLGQPLVAAADIAGNTLLR---DWLAAGEDPA-------QAPQFIEYLTAAKQRN 106

Query: 94  -GFDDIFYGTTDGAMYRSHP-ERNRADYDPRTRPWYKDAASAGKQIITTAYSDAITGALL 151
             F  +F  T  G  Y  +  +R  +  +P+ + W+     +G +       D  TG L 
Sbjct: 107 HAFTTLFASTETGHYYNENGLDRTLSRSNPKDK-WFYGYIDSGAERFINIDIDGATGELA 165

Query: 152 VTIAEPVRLNGNMSGVVGADVLIDQLIADVISMDAGKNAQTMLIDGQNGSFLAHPDKSLL 211
           + I   V   G + GV G  + + +L   +     G++ +  L+   +G    HPD +  
Sbjct: 166 LFIDYRVEKEGKLVGVAGMGLRMTELSKLIHDFSFGEHGKVFLVRN-DGLIQVHPDAAFS 224

Query: 212 LKPVTTLSSALDMRTIERAANQGELLA---LKLNGVEKFFFFTAVPDTPWYFAVQMDSDT 268
            K    L+  L     +     GE L       +G         + D  W    ++    
Sbjct: 225 GK--RQLAEQLGADAAKGVMTGGESLRSSRFSRDGERYLALGLPLRDLNWTLVAEVPESE 282

Query: 269 EYASHSEL--LTGLITTALLITVIVVVIVSWLVSFLFRDLGRVSKALEEIASGDADLTQR 326
            YA   +   LT LI  A+ +  +++V++  L   L R + RV+ AL +I SG  DL+ R
Sbjct: 283 IYAQMHQAVWLTSLIGGAVALVSLLLVVL--LARGLVRPIRRVTAALVQIGSGAGDLSHR 340

Query: 327 LEPRSDDEVGQLASNFNTFVSNMHTMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQD 386
           L+    DE+G LA  FN F+ +  +++ ++   S  L +  +      +  + R   QQ+
Sbjct: 341 LDDSRQDELGDLARGFNRFLDSQRSLIGEVLSTSERLRRAVEQVTQVVDNTAERSGRQQE 400

Query: 387 EINMVATAINEMAAATQEIAGNADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQV 446
              MVATA++EM    Q+IA NA   AQ +  A    +     V ++ R I+ ++ ++  
Sbjct: 401 MTEMVATAVHEMGLTVQDIARNAGDAAQASQSARDEALQAREVVQRSIRGIEGMSGDIGK 460

Query: 447 ATEVIQELEAHGHQISTILSTIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVL 506
           A + + +L      +  +L+ I++I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR L
Sbjct: 461 AADAVSQLADEVASVDEVLAVIRSISEQTNLLALNAAIEAARAGEMGRGFAVVADEVRTL 520

Query: 507 SQRTHASTKEIQQMIETLQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERI 566
           ++RT  ST E+QQMI+ L+   G AV  M   ++   + V+ +     SL  I   VE I
Sbjct: 521 ARRTQLSTDEVQQMIQRLKLGAGSAVSSMQAGQQATGSGVESSQRTGASLSAITDQVEHI 580

Query: 567 SDMATQIASAAEEQASVTSEITRNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEI 626
           SDM  Q+A+A EEQ++VT EI R   GI D++ + A E     E+   L  L+ +L +++
Sbjct: 581 SDMNHQVATATEEQSAVTEEINRTVQGISDLARETAAEVQGCREECQALRGLADDLARQM 640

Query: 627 RRFKL 631
             F+L
Sbjct: 641 GGFRL 645