Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 596 a.a., HAMP domain-containing protein from Dickeya dianthicola 67-19

 Score =  271 bits (694), Expect = 5e-77
 Identities = 182/635 (28%), Positives = 309/635 (48%), Gaps = 47/635 (7%)

Query: 5   MKLTLKHKLIGASLSAVVVMATALTWFSASQLQQQTSNAVYTRADAISSTAAKGISDWIS 64
           M  T++ +++    + +VV     T+ +     +    ++     A+++  +  ISDW++
Sbjct: 1   MLKTIRARILAVCTAIIVVALVINTFLNYRVTDKYNDESINNLLTAVTAGHSLAISDWVA 60

Query: 65  IRKSISTAFNAHIEAQN-VVPYLQQARNAGGFDDIFYGTTDGAMYRSHPERNRADYDPRT 123
            +K I T+ N  +   +  +P  +Q   AG F +++ G        + P    A+YDP  
Sbjct: 61  AKKQIITSLNTVVLTNDDPIPVFKQMTTAGSFINVYMGYASHTAKFADPGGIPANYDPTV 120

Query: 124 RPWYKDAASAGKQIITTAYSDAITGALLVTIAEPVRLNGNMSGVVGADVLIDQLIADVIS 183
           RPWY+ A   GK I T  Y D  T  ++V+   PV   G++ GV+G+DV +D +IA+V +
Sbjct: 121 RPWYQQAVREGKAIATAPYLDMATNTIVVSFVAPVLDGGSVKGVLGSDVTMDSVIANVKA 180

Query: 184 MDAGKNAQTMLIDGQNGSFLAHPDKSLLLKPVTTLSSALDMRTIERAANQGELLALKLNG 243
           +     +  +LI   +G+ +AHPD  L LK +T ++  +++  + ++      ++L ++G
Sbjct: 181 IHPTPASYGILIQA-DGTIIAHPDAKLTLKKLTEIAPQMNLGQVLKSDRP---VSLNISG 236

Query: 244 VEKFFFFTAVPDTPWYFAVQMDSDTEYASHSELLTGLITTALLITVIVVVIVSWLVSFLF 303
            +       V  T WY  V +D     A    LL   +   ++I+V+  V++  L++   
Sbjct: 237 RDMLVRTQPVTGTDWYVLVALDKAEATAGMDSLLWTSVVALVIISVLGSVVLGLLINASL 296

Query: 304 RDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFNTFVSNMHTMVLKLSHVSAAL 363
           R L ++  A+++I+ G+ DLTQRL     DEV Q+A +FN+FV  +  ++L++  +SA+L
Sbjct: 297 RRLLQIRDAMDDISHGNNDLTQRLPDEGHDEVSQIARSFNSFVDKLSMIMLQIRDISASL 356

Query: 364 AQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGNADHTAQNAGEAVTAC 423
                                Q   + VAT  N++A+ T+  A +   TA    +   A 
Sbjct: 357 ---------------------QTATDEVATGNNDLASRTESAAASLQQTAAALEQISAAV 395

Query: 424 VHGAGQVTQTQRSIQSLAEEVQVATEVIQE-------LEAHGHQISTILSTIQNIAEQTN 476
              AG   Q      +LA +     +V+ E       +E    +I  I+  I  IA QTN
Sbjct: 396 TQSAGSAQQVNDRALALANDASAGGKVVSEVINTMEAIEVASGKIGDIIGVIDGIAFQTN 455

Query: 477 LLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATTGKAVGIMD 536
           +LALNAA+EAARAGEQGRGFAVVA EVR L+QR+  + KEI+ +IE+        + +  
Sbjct: 456 ILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAQAAKEIKTLIES------TVLSVNV 509

Query: 537 DSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEITRNTVGIRD 596
            SR++         +A  ++ +I   V  ++ + ++I  A+ EQ     EI +    +  
Sbjct: 510 GSRQV--------RQAGNTMTEIVGGVSSVTTVMSEITHASGEQMRGIQEINKAVAQLDS 561

Query: 597 VSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631
           +    A     AA     L   S EL   I  FKL
Sbjct: 562 MVQQNAAMVQEAASAFGSLQSQSEELHSSISHFKL 596