Pairwise Alignments

Query, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  263 bits (671), Expect = 2e-74
 Identities = 202/648 (31%), Positives = 313/648 (48%), Gaps = 33/648 (5%)

Query: 5   MKLTLKHKLI----GASLSAVVVMATALTWFSAS------------QLQQQTSNAVYTRA 48
           M  ++K KLI     A L+A +++ +   W +               L +Q  N V  R 
Sbjct: 1   MTFSIKQKLIISLIVAVLAAAILVGSISQWIARDLVKENMEELQLPSLLKQVGNRV-DRE 59

Query: 49  DAISSTAAKGISDWISIRKSISTAFNAHIEAQNVVPYLQQARNAGGFDDIFYGT-TDGAM 107
            ++  T A GI+    I    S   ++  E + ++ YL    N   F+D+   +  D   
Sbjct: 60  ASVMLTVAHGIASNPDILAWSSAGADSAGE-RRLLSYLS---NIVEFNDLTVASFVDRTT 115

Query: 108 YRSHPERN--RADYDPRTRPWYKDAASAGKQIITTAYSDAITGALLVTIAEPVRLNGNMS 165
           Y+   +    R   +     W+    ++G+ I  + Y++   G  L    + V   G MS
Sbjct: 116 YKYWNQDGFLRVLQNDEFDGWFFAYKNSGEPISLSLYNEPGQGYRLFANYQQVNGRG-MS 174

Query: 166 GVVGADVLIDQLIADVISMDAGKNAQTMLIDGQNGSFLAHPDKSLLLKPVTTLSSALDMR 225
           GV  +   +D+L+  + ++   +     L+DG NG+ +AHP+  LL K    L+S  D  
Sbjct: 175 GVAKS---VDELLDIINAVKIAQTGFVFLVDG-NGTIIAHPNTELLGK--AKLASISDSS 228

Query: 226 TIERAAN-QGELLALK-LNGVEKFFFFTAVPDTPWYFAVQMDSDTEYASHSELLTGLITT 283
           T  +  N QG  +A     G  + F  T V    WY   Q+     YAS +     +I  
Sbjct: 229 TSGQLLNRQGFAMATSDAAGDTQLFASTYVEKAGWYVVAQVPEHELYASLNAGSRQIIIW 288

Query: 284 ALLITVIVVVIVSWLVSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFN 343
           AL+I     +I  WL   L + L  ++   +++  G  DL  R+      E+ +L   FN
Sbjct: 289 ALVIAGAFALIGIWLAGTLTKPLESLADVFQQLGRGQGDLRSRIPMPEQKEIARLVEGFN 348

Query: 344 TFVSNMHTMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQ 403
            F+ ++H  + +++  S AL   ++  A Q+ +  +  + Q+D+    A A+ EM +   
Sbjct: 349 NFIDHLHGTISQVAKTSHALKASAQDVAKQSHQTENSTKSQRDQTLQAAAALTEMGSTVN 408

Query: 404 EIAGNADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQIST 463
           E+A +A H AQNA  A T   HG     +   +I  L+ ++Q  + VIQ L+ H   I  
Sbjct: 409 EVAQSATHAAQNANMATTNSAHGREITQRAVHAINGLSGQIQDVSRVIQSLDEHTAAIGG 468

Query: 464 ILSTIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIET 523
           IL TI+ I+EQTNLLALNAAIEAARAG+ GRGF+VVADEVR L+QR   +T EIQ  I+ 
Sbjct: 469 ILDTIRGISEQTNLLALNAAIEAARAGDHGRGFSVVADEVRTLAQRAAQATDEIQVKIDK 528

Query: 524 LQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASV 583
            Q  +  AV  M+ SR      V   NE    L+ I + +  I+D+ TQ+A+A EEQA+V
Sbjct: 529 FQQDSKSAVSQMESSRARTTDVVTATNEIDKLLQDIAEEIAHINDVNTQVATATEEQATV 588

Query: 584 TSEITRNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631
             +I+RN   I   S +           + +L EL+ EL  E+ RFKL
Sbjct: 589 VEDISRNINDISASSEETLNATKILVSVSDKLDELAQELSSEVSRFKL 636