Pairwise Alignments

Query, 340 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., DNA-binding transcriptional repressor from Pseudomonas putida KT2440

 Score =  167 bits (422), Expect = 5e-46
 Identities = 99/308 (32%), Positives = 168/308 (54%), Gaps = 3/308 (0%)

Query: 1   MARIKDVAELAGVNRSTVSRIINGEGKFKEETRRKVEQAMAQLNYRPSAIARSLATSSSN 60
           MA IKDVA LAG++ +TVS ++N      E+ R KVE A+ +L+Y PSA+ARSL   S+ 
Sbjct: 1   MATIKDVAALAGISYTTVSHVLNKTRPVSEQVRLKVEAAIIELDYVPSAVARSLKARSTA 60

Query: 61  MMGLLVTYYTGGFFGEMMEQVQTELDMHHKFLITAQGHHSAQGEREAIQRFHDLRCDGYV 120
            +GLLV      +F E+   ++   + +   +I      + Q +R  ++   + R DG V
Sbjct: 61  TIGLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLV 120

Query: 121 LHSRYLSDDDLRALAQQPTPFVLLDRYVAGLEERCITFDHRGASQIVVEYLIQQGHRKIA 180
           + S    DD L++LA   TP V++DR + G++   +  DH   + +   +L++ GHR +A
Sbjct: 121 VASVGQDDDLLQSLASVRTPMVIVDRELEGVDADLVRIDHEQGAYLATRHLLELGHRDVA 180

Query: 181 CITGPLHRHNSRLRQQGYLDALAQAGILPSKSLCEEGNYGRKSGYFAMQQ-LFARHPEIT 239
            I GP     ++LR  G+  A+A+AG     S     ++    G+ A  Q L  + P  +
Sbjct: 181 YIGGPAETGVTQLRLSGFRRAMAEAGAPVPGSRVLHCDFTSPGGHAAAAQVLEGKRP--S 238

Query: 240 AVFSCSEEMTTGALQYLHEQGIAVPGRISIVSFDSVDLCESLYPTVTAVHFPISEMARAA 299
           A+F+ ++ +  G L+   E+ I+VPG +S++ FD ++L   +YP++T V   I E+  +A
Sbjct: 239 AIFAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPSLTTVGQSIRELGESA 298

Query: 300 VQSLIAMV 307
              L+  +
Sbjct: 299 ASLLLTRI 306