Pairwise Alignments

Query, 340 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., ribose operon transcriptional repressor RbsR from Pectobacterium carotovorum WPP14

 Score =  148 bits (373), Expect = 2e-40
 Identities = 94/313 (30%), Positives = 157/313 (50%), Gaps = 1/313 (0%)

Query: 1   MARIKDVAELAGVNRSTVSRIINGEGKFKEETRRKVEQAMAQLNYRPSAIARSLATSSSN 60
           MA +KDVA LAGV+ STVS +IN      +  R KV +A+  LNY PSA+ARSL  + + 
Sbjct: 1   MATMKDVARLAGVSTSTVSHVINNNRFVSDTIREKVMKAVEDLNYAPSALARSLKINQTR 60

Query: 61  MMGLLVTYYTGGFFGEMMEQVQTELDMHHKFLITAQGHHSAQGEREAIQRFHDLRCDGYV 120
            +G+L+T     F+ E++  V+         LI             +++     R DG +
Sbjct: 61  TIGMLLTASNNPFYAEVVRGVERCCYERGYSLILCNTEGDRDRMSHSLETLLQKRVDGVL 120

Query: 121 LHSRYLSDDDLRALAQQPT-PFVLLDRYVAGLEERCITFDHRGASQIVVEYLIQQGHRKI 179
           L            +++ P+ P V++D          I  +     +I   YLI +G++KI
Sbjct: 121 LMCTENHRPLPEMMSRYPSIPMVMMDWAPFEGVMDVIKDNSLLGGEIATNYLISRGYKKI 180

Query: 180 ACITGPLHRHNSRLRQQGYLDALAQAGILPSKSLCEEGNYGRKSGYFAMQQLFARHPEIT 239
           ACI GP  +  +  R +GY  A+  AG+         G++  ++GY AMQQL A   +  
Sbjct: 181 ACIAGPKDKTTAYNRLEGYRQAMQLAGLFIPADYEIFGDFEFEAGYRAMQQLLALEDKPE 240

Query: 240 AVFSCSEEMTTGALQYLHEQGIAVPGRISIVSFDSVDLCESLYPTVTAVHFPISEMARAA 299
           AVF+ ++ M  G    L++ G+++P  ++++ +D ++L   + P +T VH P  E+   A
Sbjct: 241 AVFASNDAMAVGVYHALYQAGLSIPQDMAVIGYDDIELARYMSPPLTTVHQPKDELGELA 300

Query: 300 VQSLIAMVKQQPT 312
           V +L+  ++   T
Sbjct: 301 VDTLLYRLEHPNT 313