Pairwise Alignments

Query, 340 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., Galactose operon repressor, GalR-LacI family of transcriptional regulators from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  211 bits (538), Expect = 2e-59
 Identities = 111/312 (35%), Positives = 179/312 (57%), Gaps = 1/312 (0%)

Query: 1   MARIKDVAELAGVNRSTVSRIINGEGKFKEETRRKVEQAMAQLNYRPSAIARSLATSSSN 60
           MA + DV+  AGV+++TVSR++NG G+ KE TR+KV  AM  L YRP+ +ARSLA  +SN
Sbjct: 1   MATMLDVSRHAGVSKATVSRVLNGTGQVKESTRQKVFTAMQALGYRPNLLARSLANRTSN 60

Query: 61  MMGLLVTYYTGGFFGEMMEQVQTELDMHHKFLITAQGHHSAQGEREAIQRFHDLRCDGYV 120
            +GL+V+ + G +FG ++ +   + + H+K LI   GH + + E++A+Q   D +CD  +
Sbjct: 61  SIGLVVSTFDGFYFGSLLRRASRQAESHNKQLIVTDGHDTPEREQKAVQMLADRQCDAII 120

Query: 121 LHSRYLSDDDLRALAQ-QPTPFVLLDRYVAGLEERCITFDHRGASQIVVEYLIQQGHRKI 179
           L++RY+ +  + +L      P V+++R V    +R I F+   A+   VEYLI QGHR I
Sbjct: 121 LYTRYMDELAILSLIDATEMPLVIINRNVTQARDRAIFFEQETAAFQAVEYLITQGHRDI 180

Query: 180 ACITGPLHRHNSRLRQQGYLDALAQAGILPSKSLCEEGNYGRKSGYFAMQQLFARHPEIT 239
           ACIT P+H      R  GY  AL + GI    +  + G+Y    GY A ++L       +
Sbjct: 181 ACITLPVHTPTGTSRVAGYRKALEKYGIPWQPAKVKYGDYTLTRGYDACRELLEEGVTFS 240

Query: 240 AVFSCSEEMTTGALQYLHEQGIAVPGRISIVSFDSVDLCESLYPTVTAVHFPISEMARAA 299
           A+F+C+++   GA + L + G+ +P  +S+  FD       L P ++ V+ PI  M   A
Sbjct: 241 ALFACNDDTALGAAKALRQAGLRIPQDVSLFGFDDAPGATWLEPGLSTVYLPIEAMIATA 300

Query: 300 VQSLIAMVKQQP 311
           +   + +   +P
Sbjct: 301 IDQAVRLANSEP 312