Pairwise Alignments

Query, 340 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., DNA-binding transcriptional repressor of ribose metabolism (NCBI) from Escherichia coli BW25113

 Score =  166 bits (420), Expect = 8e-46
 Identities = 105/328 (32%), Positives = 168/328 (51%), Gaps = 4/328 (1%)

Query: 1   MARIKDVAELAGVNRSTVSRIINGEGKFKEETRRKVEQAMAQLNYRPSAIARSLATSSSN 60
           MA +KDVA LAGV+ STVS +IN +    E    KVE A+ +LNY PSA+ARSL  + ++
Sbjct: 1   MATMKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELNYAPSALARSLKLNQTH 60

Query: 61  MMGLLVTYYTGGFFGEMMEQVQTELDMHHKFLITAQGHHSAQGEREAIQRFHDLRCDGYV 120
            +G+L+T  T  F+ E++  V+         L+        Q     ++     R DG +
Sbjct: 61  TIGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLL 120

Query: 121 LHSRYLSDDDLRALAQQPT-PFVLLDRYVAGLEERCITFDHRGASQIVVEYLIQQGHRKI 179
           L            + + PT P V++D      +   I  +      +  +YLI +GH +I
Sbjct: 121 LLCTETHQPSREIMQRYPTVPTVMMDWAPFDGDSDLIQDNSLLGGDLATQYLIDKGHTRI 180

Query: 180 ACITGPLHRHNSRLRQQGYLDALAQAGILPSKSLCEEGNYGRKSGYFAMQQLFARHPEIT 239
           ACITGPL +  +RLR +GY  A+ +AG+         G++    G+ AM+QL +      
Sbjct: 181 ACITGPLDKTPARLRLEGYRAAMKRAGLNIPDGYEVTGDFEFNGGFDAMRQLLSHPLRPQ 240

Query: 240 AVFSCSEEMTTGALQYLHEQGIAVPGRISIVSFDSVDLCESLYPTVTAVHFPISEMARAA 299
           AVF+ ++ M  G  Q L++  + VP  I+++ +D ++L   + P +T +H P  E+   A
Sbjct: 241 AVFTGNDAMAVGVYQALYQAELQVPQDIAVIGYDDIELASFMTPPLTTIHQPKDELGELA 300

Query: 300 VQSLIAMVKQQPTVGPQSFR--PILKKR 325
           +  LI  +  QPT+  Q  +  PIL +R
Sbjct: 301 IDVLIHRI-TQPTLQQQRLQLTPILMER 327