Pairwise Alignments

Query, 340 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., DNA-binding transcriptional regulator CytR from Escherichia coli ECRC62

 Score =  145 bits (367), Expect = 1e-39
 Identities = 94/309 (30%), Positives = 150/309 (48%)

Query: 2   ARIKDVAELAGVNRSTVSRIINGEGKFKEETRRKVEQAMAQLNYRPSAIARSLATSSSNM 61
           A +KDVA  A V+ +TVSR +    K  + TR +VE+A  ++ Y P  + R++  + S  
Sbjct: 10  ATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRT 69

Query: 62  MGLLVTYYTGGFFGEMMEQVQTELDMHHKFLITAQGHHSAQGEREAIQRFHDLRCDGYVL 121
           + ++V      FF E++  ++     H   ++     H  Q E+  I      + DG +L
Sbjct: 70  ILVIVPDICDPFFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLL 129

Query: 122 HSRYLSDDDLRALAQQPTPFVLLDRYVAGLEERCITFDHRGASQIVVEYLIQQGHRKIAC 181
               L  D      +   P V+ + +   LE   +  D+  A+   V YL +QGH++I C
Sbjct: 130 LGSRLPFDASIEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFDAVNYLYEQGHKRIGC 189

Query: 182 ITGPLHRHNSRLRQQGYLDALAQAGILPSKSLCEEGNYGRKSGYFAMQQLFARHPEITAV 241
           I GP        R QGY+ AL + GI+        G++  ++G  AMQQL       TAV
Sbjct: 190 IAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLLDLPQPPTAV 249

Query: 242 FSCSEEMTTGALQYLHEQGIAVPGRISIVSFDSVDLCESLYPTVTAVHFPISEMARAAVQ 301
           F  S+ M  GAL     QG+ VP  +SI+ FD++DL +   P +T +  P  E+ R A+ 
Sbjct: 250 FCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAML 309

Query: 302 SLIAMVKQQ 310
            L+  ++ Q
Sbjct: 310 LLLDQMQGQ 318