Pairwise Alignments

Query, 340 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., transcriptional repressor, hypoxanthine-binding from Escherichia coli BL21

 Score =  148 bits (374), Expect = 2e-40
 Identities = 103/335 (30%), Positives = 166/335 (49%), Gaps = 5/335 (1%)

Query: 1   MARIKDVAELAGVNRSTVSRIINGEGKFKEETRRKVEQAMAQLNYRPSAIARSLATSSSN 60
           MA IKDVA+ A V+ +TVS +IN      EETR  V  A+ +L+Y PSA+ARSL  + + 
Sbjct: 1   MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTK 60

Query: 61  MMGLLVTYYTGGFFGEMMEQVQTELDMHHKFLITAQGHHSAQGEREAIQRFHDLRCDGYV 120
            +GLL T     +F E++E V+         LI     ++ + +R  +      R DG +
Sbjct: 61  SIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLL 120

Query: 121 LHSRYLSDDDLRALAQ-QPTPFVLLDRYVAGLEERCITFDHR-GASQIVVEYLIQQGHRK 178
           +      +  L  L + +  P V++D   A  +      D+      +   YLI++GHR+
Sbjct: 121 VMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHRE 180

Query: 179 IACITGPLHRHNSRLRQQGYLDALAQAGILPSKSLCEEGNYGRKSGYFAMQQLFARHPEI 238
           I  I GPL R+    R  G++ A+ +A I   +S   +G++  +SGY AMQQ+ ++    
Sbjct: 181 IGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRP 240

Query: 239 TAVFSCSEEMTTGALQYLHEQGIAVPGRISIVSFDSVDLCESLYPTVTAVHFPISEMARA 298
           TAVF   + M  GAL    E G+ VP  +S++ +D+V       P +T +H P   +   
Sbjct: 241 TAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGET 300

Query: 299 AVQSLIAMV---KQQPTVGPQSFRPILKKRHADQP 330
           A   L+  +   +++P       R I ++  AD P
Sbjct: 301 AFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGP 335